RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSDNVG00000001017	Gene ID	112981192	Accession	-
Symbol		Alias	-	Full Name	zinc finger CCHC-type containing 17
Status	Confidence	Length	17560 bases	Strand	Plus strand
Position	PTEY01000172.1 : 1737550 - 1755109	RNA binding domain	S1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSDNVP00000001401	S1	PF00575	5.8e-10	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSDNVT00000001656	2166	240aa	ENSDNVP00000001401

Gene Model

Click here to download ENSDNVG00000001017's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSDNVG00000001017's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDNVG00000001017

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDNVG00000001017

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression