Description

Ensembl ID ENSDLEG00000009658 Gene ID 111169756 Accession -
Symbol ECM1 Alias - Full Name threonyl-tRNA synthetase 2, mitochondrial
Status Confidence Length 17358 bases Strand Minus strand
Position ML702109.1 : 1632001 - 1649358 RNA binding domain HGTP_anticodon , tRNA_SAD , tRNA-synt_2b
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSDLEP00000013238 HGTP_anticodon PF03129 1.4e-17 1
ENSDLEP00000013238 tRNA_SAD PF07973 2.3e-09 2
ENSDLEP00000013238 tRNA-synt_2b PF00587 1.8e-34 3
ENSDLEP00000013167 HGTP_anticodon PF03129 3.6e-07 1
ENSDLEP00000013167 tRNA_SAD PF07973 4.4e-09 2
ENSDLEP00000013167 tRNA-synt_2b PF00587 4.4e-34 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
ECM1-202 ENSDLET00000014536 3570 1189aa ENSDLEP00000013167
ECM1-201 ENSDLET00000014588 2578 543aa ENSDLEP00000013210
ECM1-203 ENSDLET00000014617 2157 718aa ENSDLEP00000013238

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000002641036.421121.6842delphinapterus_leucasENSDLEP0000001316714.558.66274
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000002819857.783345.0809delphinapterus_leucasENSDLEP0000001316739.024430.4458
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001864469.154950.5634delphinapterus_leucasENSDLEP0000001316741.295230.1934
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001220438.837922.3242delphinapterus_leucasENSDLEP0000001316710.68126.13961

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316727.081622.1194ornithorhynchus_anatinusENSOANP0000004835140.099632.7522
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316749.032842.9773sarcophilus_harrisiiENSSHAP0000002435081.767271.669
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316746.76242.0521notamacropus_eugeniiENSMEUP0000001299177.329669.541
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316728.679626.9134choloepus_hoffmanniENSCHOP0000000070774.454169.869
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.592951.9765dasypus_novemcinctusENSDNOP0000000460392.447686.4336
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316742.052138.6039erinaceus_europaeusENSEEUP0000000016069.54163.8387
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316719.932718.7553erinaceus_europaeusENSEEUP0000001153364.577760.7629
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316750.967247.0984echinops_telfairiENSETEP0000000696684.636978.2123
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.004251.8082callithrix_jacchusENSCJAP0000001196091.086385.7939
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316753.406250.3785cercocebus_atysENSCATP0000002246390.844185.6938
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316754.247350.8831macaca_fascicularisENSMFAP0000001462888.720883.2187
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.172452.0606macaca_mulattaENSMMUP0000000823091.364986.2117
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316744.491240.6224macaca_nemestrinaENSMNEP0000003813479.548972.6316
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.088351.8082papio_anubisENSPANP0000001189991.225685.7939
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.004251.9765mandrillus_leucophaeusENSMLEP0000001207191.086386.0724
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316747.014343.9865gorilla_gorillaENSGGOP0000000617790.894385.0406
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.172451.9765pan_paniscusENSPPAP0000003865691.364986.0724
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.340652.1447pan_troglodytesENSPTRP0000000212991.643586.351
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.424752.1447pongo_abeliiENSPPYP0000004160291.782786.351
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.256552.0606homo_sapiensENSP0000035806091.504286.2117
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.256552.0606canis_lupus_familiarisENSCAFP0084502434991.504286.2117
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.004251.8923vulpes_vulpesENSVVUP0000001564390.707485.5756
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316746.930245.4163ursus_americanusENSUAMP0000003126991.027788.0914
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.67752.8175ailuropoda_melanoleucaENSAMEP0000000167392.200687.4652
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.845253.238mustela_putorius_furoENSMPUP0000000475692.094387.7947
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.67752.9016felis_catusENSFCAP0000000157792.847188.2188
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.592952.7334panthera_leoENSPLOP0000002645792.706987.9383
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316737.93136.3331tursiops_truncatusENSTTRP0000001007476.570573.3447
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.508852.6493panthera_pardusENSPPRP0000002785592.566687.798
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316742.977338.6039dipodomys_ordiiENSDORP0000000709984.883776.2458
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316757.022755.0883physeter_catodonENSPCTP0000502856597.413894.1092
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316752.901649.3692mus_spretusMGP_SPRETEiJ_P006159086.998681.1895
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316753.658549.7897cricetulus_griseus_chok1gshdENSCGRP0000102611788.243481.8811
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.518153.9109ovis_aries_rambouilletENSOARP0002001061593.593389.2758
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.602253.238equus_asinusENSEASP0000505935593.342687.7947
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316754.751950.7149marmota_marmota_marmotaENSMMMP0000002211390.668583.9833
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316752.985749.4533mus_spicilegusENSMSIP0000000800387.136981.3278
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316753.153949.7897mus_caroliMGP_CAROLIEiJ_P005921487.413681.8811
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316752.649348.5282microcebus_murinusENSMICP0000000731288.293481.3822
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.181753.6585bos_taurusENSBTAP0000000494893.036288.8579
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.088352.2288loxodonta_africanaENSLAFP0000000416490.84686.1304
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316754.920151.8082aotus_nancymaaeENSANAP0000000356790.947185.7939
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316758.452556.6863balaenoptera_musculusENSBMSP0001002029496.796793.8719
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316749.116943.566monodelphis_domesticaENSMODP0000002343781.450572.2455
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316751.724146.8461sorex_araneusENSSARP0000001187487.35879.1193
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.686353.4062equus_caballusENSECAP0000001204393.481388.0721
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316749.957946.762saimiri_boliviensis_boliviensisENSSBOP0000000034690.825785.0153
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316753.23849.5374mus_pahariMGP_PahariEiJ_P007018287.551981.4661
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.349953.8267bos_mutusENSBMUP0000003161892.926588.7656
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316754.163251.8082rhinolophus_ferrumequinumENSRFEP0001003113887.61983.8095
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.265853.5744bison_bison_bisonENSBBBP0000001586093.175588.7187
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316753.742649.9579jaculus_jaculusENSJJAP0000002160088.873482.6147
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316752.733447.9394heterocephalus_glaber_femaleENSHGLP0000001289587.692379.7203
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.256552.0606canis_lupus_dingoENSCAFP0002002497891.504286.2117
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316749.789744.1548phascolarctos_cinereusENSPCIP0000001098682.566273.2218
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.508852.0606prolemur_simusENSPSMP0000003063091.92286.2117
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316753.490349.7897microtus_ochrogasterENSMOCP0000002089987.966881.8811
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.172450.799sciurus_vulgarisENSSVLP0000500132891.364984.1226
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.929453.238camelus_dromedariusENSCDRP0000502475592.618488.1616
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316746.846143.1455ochotona_princepsENSOPRP0000000932377.576671.4485
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316749.621543.7342vombatus_ursinusENSVURP0001000061082.287372.5244
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316749.621543.7342vombatus_ursinusENSVURP0001001992482.058472.3227
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.013553.4062neovison_visonENSNVIP0000002145392.757788.4401
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316754.667850.7149urocitellus_parryiiENSUPAP0001000267290.529383.9833
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316757.359154.2473catagonus_wagneriENSCWAP0000001125194.986189.8329
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316744.154842.4727procavia_capensisENSPCAP0000001558278.828875.8258
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316753.742650.0421peromyscus_maniculatus_bairdiiENSPEMP0000001438488.259782.1823
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.602254.1632cervus_hanglu_yarkandensisENSCHYP0000001799193.732689.6936
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316752.39747.9394chinchilla_lanigeraENSCLAP0000002515788.620281.0811
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.256552.2288rhinopithecus_roxellanaENSRROP0000001342991.504286.4902
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316750.294446.9302rhinopithecus_bietiENSRBIP0000004251385.673479.9427
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316741.12738.3516tupaia_belangeriENSTBEP0000000345868.487463.8655
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316754.583752.6493bos_indicus_hybridENSBIXP0000502394381.532778.6432
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316752.985749.4533mus_musculusENSMUSP0000002975287.136981.3278
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.265853.7426moschus_moschiferusENSMMSP0000002666193.175588.9972
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316754.751951.8923panthera_tigris_altaicaENSPTIP0000000618191.304386.5358
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316739.697237.5946vicugna_pacosENSVPAP0000000504268.604764.9709
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.424752.3129nomascus_leucogenysENSNLEP0000001202991.782786.6295
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.845253.0698ursus_maritimusENSUMAP0000000459592.479187.883
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316752.985749.201rattus_norvegicusENSRNOP0000007288687.136980.9129
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316752.985749.3692mesocricetus_auratusENSMAUP0000000618887.136981.1895
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316757.611454.5837sus_scrofaENSSSCP0000002208795.403990.39
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316753.490349.7897ictidomys_tridecemlineatusENSSTOP0000000745989.703883.4979
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316752.649348.5282octodon_degusENSODEP0000001613786.344879.5862
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316754.751951.8923oryctolagus_cuniculusENSOCUP0000004628490.668585.9332
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.013552.5652carlito_syrichtaENSTSYP0000002353192.757787.0474
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.508851.9765propithecus_coquereliENSPCOP0000001147191.92286.0724
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316754.83651.5559cebus_imitatorENSCCAP0000003259790.807885.376
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.265852.9016myotis_lucifugusENSMLUP0000001194192.787887.2399
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316758.704857.3591phocoena_sinusENSPSNP0000000259097.214594.9861
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316759.041257.5273monodon_monocerosENSMMNP0001500619397.771695.2646
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.349953.8267bos_grunniensENSBGRP0000000118892.03387.9121
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316756.265853.6585capra_hircusENSCHIP0000001963593.175588.8579
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316755.256552.2288chlorocebus_sabaeusENSCSAP0000001409491.504286.4902
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316721.530719.6804cavia_porcellusENSCPOP0000000950688.275980.6897
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316746.846142.9773otolemur_garnettiiENSOGAP0000000479680.959374.2733
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316710.933610.5971nannospalax_galiliENSNGAP0000002671391.549388.7324
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316753.153949.6215pteropus_vampyrusENSPVAP0000000410888.022382.1727
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316737.762828.1749caenorhabditis_elegansC47D12.6a.161.93146.2069
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316714.80248.15812caenorhabditis_elegansT20H4.3a.130.292616.6954
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316740.454229.857drosophila_melanogasterFBpp031209564.390947.5234
ENSDLEG00000009658delphinapterus_leucasENSDLEP000000131674.037012.18671petromyzon_marinusENSPMAP0000000015522.641512.2642
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316713.54087.56939eptatretus_burgeriENSEBUP0000002611130.608417.1103
ENSDLEG00000009658delphinapterus_leucasENSDLEP000000131674.878052.52313lepisosteus_oculatusENSLOCP0000002075726.976713.9535
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316738.603928.4272ciona_savignyiENSCSAVP0000000664764.016747.1409
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316738.183326.8293saccharomyces_cerevisiaeYIL078W61.852943.4605
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316717.40969.58789saccharomyces_cerevisiaeYHR020W30.087216.5698
ENSDLEG00000009658delphinapterus_leucasENSDLEP000000131677.232975.04626erpetoichthys_calabaricusENSECRP0000002570062.318843.4783
ENSDLEG00000009658delphinapterus_leucasENSDLEP0000001316715.64348.57864poecilia_latipinnaENSPLAP0000001844728.837215.814
ENSDLEG00000009658delphinapterus_leucasENSDLEP000000131674.962152.52313tetraodon_nigroviridisENSTNIP0000000441025.877213.1579

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression