RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSDLEG00000001971	Gene ID		Accession	-
Symbol	LRPPRC	Alias	-	Full Name	leucine rich pentatricopeptide repeat containing
Status	Confidence	Length	102737 bases	Strand	Plus strand
Position	ML702047.1 : 8513143 - 8615879	RNA binding domain	PPR_3 , PPR_long , PPR
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
ENSDLEP00000004446	PPR_3	PF13812	5.8e-31	1
ENSDLEP00000004446	PPR_3	PF13812	5.8e-31	2
ENSDLEP00000004446	PPR_3	PF13812	5.8e-31	3
ENSDLEP00000004446	PPR_long	PF17177	5.8e-29	4
ENSDLEP00000004446	PPR	PF01535	1e-30	5
ENSDLEP00000004446	PPR	PF01535	1e-30	6
ENSDLEP00000004446	PPR	PF01535	1e-30	7
ENSDLEP00000004446	PPR	PF01535	1e-30	8
ENSDLEP00000004446	PPR	PF01535	1e-30	9
ENSDLEP00000004446	PPR	PF01535	1e-30	10
ENSDLEP00000004494	PPR_3	PF13812	5.6e-31	1
ENSDLEP00000004494	PPR_3	PF13812	5.6e-31	2
ENSDLEP00000004494	PPR_3	PF13812	5.6e-31	3
ENSDLEP00000004494	PPR_long	PF17177	1.9e-28	4
ENSDLEP00000004494	PPR	PF01535	1e-30	5
ENSDLEP00000004494	PPR	PF01535	1e-30	6
ENSDLEP00000004494	PPR	PF01535	1e-30	7
ENSDLEP00000004494	PPR	PF01535	1e-30	8
ENSDLEP00000004494	PPR	PF01535	1e-30	9
ENSDLEP00000004494	PPR	PF01535	1e-30	10
ENSDLEP00000004513	PPR_3	PF13812	5.1e-31	1
ENSDLEP00000004513	PPR_3	PF13812	5.1e-31	2
ENSDLEP00000004513	PPR_3	PF13812	5.1e-31	3
ENSDLEP00000004513	PPR_long	PF17177	8.9e-28	4
ENSDLEP00000004513	PPR	PF01535	1.3e-31	5
ENSDLEP00000004513	PPR	PF01535	1.3e-31	6
ENSDLEP00000004513	PPR	PF01535	1.3e-31	7
ENSDLEP00000004513	PPR	PF01535	1.3e-31	8
ENSDLEP00000004513	PPR	PF01535	1.3e-31	9
ENSDLEP00000004513	PPR	PF01535	1.3e-31	10
ENSDLEP00000004527	PPR_3	PF13812	5e-31	1
ENSDLEP00000004527	PPR_3	PF13812	5e-31	2
ENSDLEP00000004527	PPR_3	PF13812	5e-31	3
ENSDLEP00000004527	PPR_long	PF17177	8.5e-28	4
ENSDLEP00000004527	PPR	PF01535	1.2e-31	5
ENSDLEP00000004527	PPR	PF01535	1.2e-31	6
ENSDLEP00000004527	PPR	PF01535	1.2e-31	7
ENSDLEP00000004527	PPR	PF01535	1.2e-31	8
ENSDLEP00000004527	PPR	PF01535	1.2e-31	9
ENSDLEP00000004527	PPR	PF01535	1.2e-31	10
ENSDLEP00000004574	PPR_3	PF13812	2.8e-31	1
ENSDLEP00000004574	PPR_3	PF13812	2.8e-31	2
ENSDLEP00000004574	PPR_3	PF13812	2.8e-31	3
ENSDLEP00000004574	PPR_long	PF17177	1.3e-29	4
ENSDLEP00000004574	PPR	PF01535	2.1e-29	5
ENSDLEP00000004574	PPR	PF01535	2.1e-29	6
ENSDLEP00000004574	PPR	PF01535	2.1e-29	7
ENSDLEP00000004574	PPR	PF01535	2.1e-29	8
ENSDLEP00000004574	PPR	PF01535	2.1e-29	9
ENSDLEP00000004574	PPR	PF01535	2.1e-29	10
ENSDLEP00000004585	PPR_3	PF13812	6.4e-31	1
ENSDLEP00000004585	PPR_3	PF13812	6.4e-31	2
ENSDLEP00000004585	PPR_3	PF13812	6.4e-31	3
ENSDLEP00000004585	PPR_long	PF17177	7.3e-29	4
ENSDLEP00000004585	PPR	PF01535	1.1e-30	5
ENSDLEP00000004585	PPR	PF01535	1.1e-30	6
ENSDLEP00000004585	PPR	PF01535	1.1e-30	7
ENSDLEP00000004585	PPR	PF01535	1.1e-30	8
ENSDLEP00000004585	PPR	PF01535	1.1e-30	9
ENSDLEP00000004585	PPR	PF01535	1.1e-30	10
ENSDLEP00000004594	PPR_3	PF13812	4.6e-31	1
ENSDLEP00000004594	PPR_3	PF13812	4.6e-31	2
ENSDLEP00000004594	PPR_3	PF13812	4.6e-31	3
ENSDLEP00000004594	PPR_long	PF17177	4.2e-29	4
ENSDLEP00000004594	PPR	PF01535	2.9e-29	5
ENSDLEP00000004594	PPR	PF01535	2.9e-29	6
ENSDLEP00000004594	PPR	PF01535	2.9e-29	7
ENSDLEP00000004594	PPR	PF01535	2.9e-29	8
ENSDLEP00000004594	PPR	PF01535	2.9e-29	9
ENSDLEP00000004594	PPR	PF01535	2.9e-29	10
ENSDLEP00000004613	PPR_3	PF13812	5.8e-23	1
ENSDLEP00000004613	PPR_3	PF13812	5.8e-23	2
ENSDLEP00000004613	PPR_3	PF13812	5.8e-23	3
ENSDLEP00000004613	PPR_long	PF17177	1.2e-20	4
ENSDLEP00000004613	PPR_long	PF17177	1.2e-20	5
ENSDLEP00000004613	PPR	PF01535	8.6e-19	6
ENSDLEP00000004613	PPR	PF01535	8.6e-19	7
ENSDLEP00000004613	PPR	PF01535	8.6e-19	8

Showing 1 to 78 of 78 entries

Pubmed ID	Full Name	Cell	Author	Time	Doi
No data available in table

Pubmed ID	Title	Author	Time	Journal
No data available in table

Transcripts

Show entries

Search:

Name	Transcript ID	bp	Protein	Translation ID
LRPPRC-201	ENSDLET00000004974	5152	1383aa	ENSDLEP00000004446
LRPPRC-202	ENSDLET00000005024	5140	1379aa	ENSDLEP00000004494
LRPPRC-203	ENSDLET00000005044	5104	1367aa	ENSDLEP00000004513
LRPPRC-204	ENSDLET00000005059	5086	1361aa	ENSDLEP00000004527
LRPPRC-205	ENSDLET00000005110	3921	1306aa	ENSDLEP00000004574
LRPPRC-206	ENSDLET00000005122	4179	1392aa	ENSDLEP00000004585
LRPPRC-207	ENSDLET00000005132	4137	1378aa	ENSDLEP00000004594
LRPPRC-208	ENSDLET00000005151	1641	546aa	ENSDLEP00000004613

Showing 1 to 8 of 8 entries

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Gene Model

Click here to download ENSDLEG00000001971's gene model file

ensgID	Trait	pValue	Pubmed ID
No data available in table

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID
No data available in table

Protein-Protein Interaction (PPI)

Click here to download ENSDLEG00000001971's PPI file

Orthologs

Show entries

Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDLEG00000001971	delphinapterus_leucas	ENSDLEP00000004585	78.7356	64.2241	ornithorhynchus_anatinus	ENSOANP00000023122	78.0627	63.6752
ENSDLEG00000001971	delphinapterus_leucas	ENSDLEP00000004585	79.9569	66.7385	sarcophilus_harrisii	ENSSHAP00000043674	74.7984	62.4328
ENSDLEG00000001971	delphinapterus_leucas	ENSDLEP00000004585	56.1782	46.5517	notamacropus_eugenii	ENSMEUP00000004059	61.0938	50.625
ENSDLEG00000001971	delphinapterus_leucas	ENSDLEP00000004585	88.1466	80.9626	callithrix_jacchus	ENSCJAP00000001418	87.5803	80.4425
ENSDLEG00000001971	delphinapterus_leucas	ENSDLEP00000004585	89.1523	82.4713	macaca_fascicularis	ENSMFAP00000041864	84.9418	78.5763
ENSDLEG00000001971	delphinapterus_leucas	ENSDLEP00000004585	89.2241	82.5431	macaca_mulatta	ENSMMUP00000045037	88.9048	82.2477
ENSDLEG00000001971	delphinapterus_leucas	ENSDLEP00000004585	89.296	82.5431	papio_anubis	ENSPANP00000006402	85.0787	78.6448
ENSDLEG00000001971	delphinapterus_leucas	ENSDLEP00000004585	89.727	82.7586	mandrillus_leucophaeus	ENSMLEP00000039279	89.4059	82.4624
ENSDLEG00000001971	delphinapterus_leucas	ENSDLEP00000004585	26.9397	25.1437	gorilla_gorilla	ENSGGOP00000051572	92.1376	85.9951
ENSDLEG00000001971	delphinapterus_leucas	ENSDLEP00000004585	86.6379	78.1609	pan_paniscus	ENSPPAP00000036350	86.8876	78.3862

Showing 1 to 10 of 152 entries

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Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression