RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSDLAG00005020096	Gene ID		Accession	-
Symbol	mrpl53	Alias	-	Full Name	mitochondrial ribosomal protein L53
Status	Confidence	Length	14800 bases	Strand	Plus strand
Position	CAJNNU010000023.1 : 16839597 - 16854396	RNA binding domain	MRP_L53
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSDLAP00005066799	MRP_L53	PF10780	7.4e-17	1
ENSDLAP00005045359	MRP_L53	PF10780	2e-15	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
mrpl53-201	ENSDLAT00005072468	761	106aa	ENSDLAP00005066799
mrpl53-202	ENSDLAT00005048427	1635	119aa	ENSDLAP00005045359

Gene Model

Click here to download ENSDLAG00005020096's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSDLAG00005020096's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDLAG00005020096

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	52.1008	fundulus_heteroclitus	ENSFHEP00000028665	67.5926	57.4074
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	50.4202	poecilia_reticulata	ENSPREP00000011924	71.1538	57.6923
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	50.4202	xiphophorus_maculatus	ENSXMAP00000029461	67.5926	55.5556
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	59.6639	51.2605	cyclopterus_lumpus	ENSCLMP00005005643	65.1376	55.9633
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	54.6218	haplochromis_burtoni	ENSHBUP00000022327	68.5185	60.1852
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	54.6218	astatotilapia_calliptera	ENSACLP00000022885	68.5185	60.1852
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	60.5042	48.7395	oryzias_latipes	ENSORLP00000043168	66.6667	53.7037
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	44.5378	32.7731	oreochromis_niloticus	ENSONIP00000060766	40.458	29.771
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	63.8655	55.4622	sparus_aurata	ENSSAUP00010007800	70.3704	61.1111
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	60.5042	51.2605	lates_calcarifer	ENSLCAP00010029991	66.6667	56.4815
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	58.8235	49.5798	kryptolebias_marmoratus	ENSKMAP00000009515	47.2973	39.8649
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	49.5798	poecilia_formosa	ENSPFOP00000014385	71.1538	56.7308
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	49.5798	poecilia_formosa	ENSPFOP00000014390	68.5185	54.6296
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	63.8655	52.9412	acanthochromis_polyacanthus	ENSAPOP00000031455	70.3704	58.3333
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	52.9412	amphilophus_citrinellus	ENSACIP00000020161	67.5926	58.3333
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	60.5042	49.5798	seriola_dumerili	ENSSDUP00000015545	66.6667	54.6296
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	54.6218	neolamprologus_brichardi	ENSNBRP00000017056	68.5185	60.1852
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	53.7815	nothobranchius_furzeri	ENSNFUP00015031307	67.5926	59.2593
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	49.5798	poecilia_latipinna	ENSPLAP00000022261	71.1538	56.7308
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	54.6218	pundamilia_nyererei	ENSPNYP00000015656	68.5185	60.1852
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	64.7059	49.5798	cyprinodon_variegatus	ENSCVAP00000021080	71.2963	54.6296
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	54.6218	maylandia_zebra	ENSMZEP00005038026	68.5185	60.1852
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	54.6218	maylandia_zebra	ENSMZEP00005004715	68.5185	60.1852
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	63.0252	52.1008	amphiprion_percula	ENSAPEP00000015926	69.4444	57.4074
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	52.9412	42.0168	cottoperca_gobio	ENSCGOP00000010236	58.3333	46.2963
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	63.0252	52.1008	amphiprion_ocellaris	ENSAOCP00000011452	69.4444	57.4074
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	52.1008	mastacembelus_armatus	ENSMAMP00000041929	68.2243	57.9439
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	50.4202	anabas_testudineus	ENSATEP00000019547	68.5185	55.5556
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	63.8655	51.2605	hippocampus_comes	ENSHCOP00000015622	71.028	57.0093
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	58.8235	51.2605	labrus_bergylta	ENSLBEP00000023765	64.8148	56.4815
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	52.9412	stegastes_partitus	ENSSPAP00000026337	62.3932	53.8462
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	49.5798	scophthalmus_maximus	ENSSMAP00000048160	67.5926	54.6296
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	50.4202	oryzias_javanicus	ENSOJAP00000011780	68.5185	55.5556
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	52.1008	cynoglossus_semilaevis	ENSCSEP00000027578	62.7119	52.5424
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	59.6639	47.8992	seriola_lalandi_dorsalis	ENSSLDP00000017020	65.7407	52.7778
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	59.6639	51.2605	takifugu_rubripes	ENSTRUP00000037432	66.9811	57.5472
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	60.5042	49.5798	oryzias_sinensis	ENSOSIP00000000041	63.7168	52.2124
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	50.4202	oryzias_melastigma	ENSOMEP00000011529	67.5926	55.5556
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	59.6639	49.5798	betta_splendens	ENSBSLP00000034802	65.7407	54.6296
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	54.6218	sander_lucioperca	ENSSLUP00000004862	68.5185	60.1852
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	60.5042	52.9412	gasterosteus_aculeatus	ENSGACP00000004518	66.6667	58.3333
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	47.8992	35.2941	eptatretus_burgeri	ENSEBUP00000015553	40.7143	30
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	56.3025	36.9748	callorhinchus_milii	ENSCMIP00000002458	39.881	26.1905
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	56.3025	44.5378	latimeria_chalumnae	ENSLACP00000009951	61.4679	48.6239
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	55.4622	41.1765	lepisosteus_oculatus	ENSLOCP00000003371	61.1111	45.3704
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	56.3025	44.5378	clupea_harengus	ENSCHAP00000015667	57.265	45.2991
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	54.6218	38.6555	danio_rerio	ENSDARP00000025933	60.1852	42.5926
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	58.8235	43.6975	carassius_auratus	ENSCARP00000097762	65.4206	48.5981
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	54.6218	39.4958	carassius_auratus	ENSCARP00000092977	66.3265	47.9592
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	57.1429	42.8571	ictalurus_punctatus	ENSIPUP00000001892	63.5514	47.6636
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	58.8235	45.3782	astyanax_mexicanus	ENSAMXP00000052150	65.4206	50.4673
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	58.8235	45.3782	electrophorus_electricus	ENSEEEP00000031528	67.9612	52.4272
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	60.5042	47.0588	esox_lucius	ENSELUP00000002452	66.6667	51.8519
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	49.5798	oncorhynchus_kisutch	ENSOKIP00005023503	67.5926	54.6296
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	55.4622	39.4958	oncorhynchus_kisutch	ENSOKIP00005011293	56.8966	40.5172
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	49.5798	oncorhynchus_mykiss	ENSOMYP00000129205	67.5926	54.6296
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	63.8655	50.4202	salmo_salar	ENSSSAP00000165510	26.0274	20.5479
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	63.0252	49.5798	salmo_salar	ENSSSAP00000146590	43.6047	34.3023
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	47.0588	36.9748	salmo_trutta	ENSSTUP00000096838	74.6667	58.6667
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	49.5798	salmo_trutta	ENSSTUP00000102775	67.5926	54.6296
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	62.1849	49.5798	gadus_morhua	ENSGMOP00000003198	69.8113	55.6604
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	52.1008	31.0924	xenopus_tropicalis	ENSXETP00000106971	56.8807	33.945
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	48.7395	33.6134	chrysemys_picta_bellii	ENSCPBP00000009409	52.7273	36.3636
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	51.2605	34.4538	sphenodon_punctatus	ENSSPUP00000011764	53.9823	36.2832
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	46.2185	32.7731	laticauda_laticaudata	ENSLLTP00000000225	51.8868	36.7925
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	46.2185	31.9328	notechis_scutatus	ENSNSUP00000020512	51.8868	35.8491
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	45.3782	31.9328	pseudonaja_textilis	ENSPTXP00000008643	50.9434	35.8491
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	35.2941	22.6891	anas_platyrhynchos_platyrhynchos	ENSAPLP00000021858	40	25.7143
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	47.0588	32.7731	meleagris_gallopavo	ENSMGAP00000030656	51.8519	36.1111
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	47.8992	32.7731	gallus_gallus	ENSGALP00010004030	52.7778	36.1111
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	50.4202	36.1345	serinus_canaria	ENSSCAP00000002890	55.0459	39.4495
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	48.7395	32.7731	parus_major	ENSPMJP00000006549	53.211	35.7798
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	45.3782	31.9328	naja_naja	ENSNNAP00000017360	50.9434	35.8491
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	47.8992	pygocentrus_nattereri	ENSPNAP00000025396	56.5891	44.186
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	47.8992	36.1345	strigops_habroptila	ENSSHBP00005007709	52.2936	39.4495
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	50.4202	32.7731	taeniopygia_guttata	ENSTGUP00000012013	42.5532	27.6596
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	47.8992	31.9328	coturnix_japonica	ENSCJPP00005014128	52.7778	35.1852
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	36.9748	21.8487	pelodiscus_sinensis	ENSPSIP00000015608	45.3608	26.8041
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	49.5798	33.6134	gopherus_evgoodei	ENSGEVP00005000093	53.6364	36.3636
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	37.8151	23.5294	anser_brachyrhynchus	ENSABRP00000009353	40.5405	25.2252
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	48.7395	32.7731	ficedula_albicollis	ENSFALP00000031175	53.7037	36.1111
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	52.9412	40.3361	erpetoichthys_calabaricus	ENSECRP00000022091	58.8785	44.8598
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	53.7815	39.4958	paramormyrops_kingsleyae	ENSPKIP00000023298	60.3774	44.3396
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	52.1008	41.1765	salvator_merianae	ENSSMRP00000014043	35.0282	27.6836
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	44.5378	27.7311	leptobrachium_leishanense	ENSLLEP00000007141	50	31.1321
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	52.1008	30.2521	leptobrachium_leishanense	ENSLLEP00000042860	40.7895	23.6842
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	56.3025	40.3361	denticeps_clupeoides	ENSDCDP00000052013	62.6168	44.8598
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	48.7395	33.6134	terrapene_carolina_triunguis	ENSTMTP00000008425	52.7273	36.3636
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	36.9748	21.0084	podarcis_muralis	ENSPMRP00000010760	41.1215	23.3645
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	57.9832	46.2185	hucho_hucho	ENSHHUP00000043845	63.8889	50.9259
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	52.1008	37.8151	hucho_hucho	ENSHHUP00000062789	65.2632	47.3684
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	49.5798	29.4118	cyprinus_carpio_carpio	ENSCCRP00000012214	44.697	26.5152
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	47.8992	27.7311	cyprinus_carpio_carpio	ENSCCRP00000152510	53.271	30.8411
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	61.3445	50.4202	myripristis_murdjan	ENSMMDP00005012801	67.5926	55.5556
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	51.2605	37.8151	scleropages_formosus	ENSSFOP00015006909	57.5472	42.4528
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	57.9832	43.6975	sinocyclocheilus_grahami	ENSSGRP00000050474	63.8889	48.1481
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	58.8235	43.6975	sinocyclocheilus_grahami	ENSSGRP00000031743	65.4206	48.5981
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	50.4202	36.1345	aquila_chrysaetos_chrysaetos	ENSACCP00020006713	55.0459	39.4495
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	36.1345	23.5294	chelonoidis_abingdonii	ENSCABP00000020939	42.5743	27.7228
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	60.5042	48.7395	oncorhynchus_tshawytscha	ENSOTSP00005044939	66.6667	53.7037
ENSDLAG00005020096	dicentrarchus_labrax	ENSDLAP00005045359	51.2605	35.2941	oncorhynchus_tshawytscha	ENSOTSP00005006629	64.2105	44.2105

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression