| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSDLAG00005002149 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
13990 bases |
Strand |
Minus strand |
| Position |
CAJNNU010000007.1 : 10647906 - 10661895 |
RNA binding domain |
Fox-1_C , RRM_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSDLAP00005079992 |
Fox-1_C |
PF12414 |
6.3e-32 |
1 |
| ENSDLAP00005079992 |
RRM_1 |
PF00076 |
2.1e-17 |
2 |
| ENSDLAP00005004875 |
Fox-1_C |
PF12414 |
6.6e-32 |
1 |
| ENSDLAP00005004875 |
RRM_1 |
PF00076 |
2e-17 |
2 |
| ENSDLAP00005078033 |
Fox-1_C |
PF12414 |
1.1e-31 |
1 |
| ENSDLAP00005078033 |
RRM_1 |
PF00076 |
2.7e-17 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSDLAT00005005031 |
2540 |
371aa |
ENSDLAP00005004875 |
| - |
ENSDLAT00005080479 |
2958 |
439aa |
ENSDLAP00005078033 |
| - |
ENSDLAT00005084971 |
2855 |
383aa |
ENSDLAP00005079992 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005077998 | 60.804 | 52.0101 | dicentrarchus_labrax | ENSDLAP00005078033 | 55.1253 | 47.1526 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005074527 | 63.1016 | 53.7433 | dicentrarchus_labrax | ENSDLAP00005078033 | 53.7585 | 45.7859 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005019123 | 56.4477 | 46.2287 | dicentrarchus_labrax | ENSDLAP00005078033 | 52.8474 | 43.2802 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005074637 | 46.8 | 37.2 | dicentrarchus_labrax | ENSDLAP00005078033 | 53.303 | 42.369 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005076236 | 51.5351 | 41.886 | dicentrarchus_labrax | ENSDLAP00005078033 | 53.5308 | 43.508 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 61.5034 | 57.8588 | fundulus_heteroclitus | ENSFHEP00000030947 | 86.5385 | 81.4103 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 75.6264 | 73.1207 | poecilia_reticulata | ENSPREP00000011711 | 91.2088 | 88.1868 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 79.4989 | 76.7654 | xiphophorus_maculatus | ENSXMAP00000030098 | 91.6011 | 88.4514 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 80.1822 | 77.221 | cyclopterus_lumpus | ENSCLMP00005045297 | 92.876 | 89.4459 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 78.5877 | 76.3098 | haplochromis_burtoni | ENSHBUP00000011742 | 90.7895 | 88.1579 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 74.7153 | 71.754 | astatotilapia_calliptera | ENSACLP00000031576 | 79.0361 | 75.9036 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 78.3599 | 75.3986 | oryzias_latipes | ENSORLP00000014121 | 88.8889 | 85.5297 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 79.2711 | 76.9932 | oreochromis_niloticus | ENSONIP00000036934 | 91.5789 | 88.9474 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 82.9157 | 82.2323 | sparus_aurata | ENSSAUP00010051049 | 95.0392 | 94.2559 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 81.7768 | 80.8656 | lates_calcarifer | ENSLCAP00010019420 | 93.7337 | 92.6893 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 78.5877 | 76.3098 | kryptolebias_marmoratus | ENSKMAP00000006833 | 89.6104 | 87.013 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 79.2711 | 76.7654 | poecilia_formosa | ENSPFOP00000009377 | 91.3386 | 88.4514 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 50.7973 | 49.4305 | tetraodon_nigroviridis | ENSTNIP00000010913 | 84.4697 | 82.197 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 80.41 | 78.1321 | acanthochromis_polyacanthus | ENSAPOP00000013474 | 93.3862 | 90.7407 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 73.1207 | 71.0706 | amphilophus_citrinellus | ENSACIP00000008217 | 91.453 | 88.8889 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 78.5877 | 76.5376 | seriola_dumerili | ENSSDUP00000011990 | 89.6104 | 87.2727 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 77.9043 | 75.6264 | neolamprologus_brichardi | ENSNBRP00000004314 | 90.7162 | 88.0637 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 68.3371 | 64.4647 | nothobranchius_furzeri | ENSNFUP00015029844 | 80.8625 | 76.2803 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 63.0979 | 61.0478 | poecilia_latipinna | ENSPLAP00000025632 | 90.228 | 87.2964 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 78.5877 | 76.082 | pundamilia_nyererei | ENSPNYP00000002656 | 90.7895 | 87.8947 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 79.0433 | 76.5376 | cyprinodon_variegatus | ENSCVAP00000024122 | 91.0761 | 88.189 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 82.0046 | 80.8656 | larimichthys_crocea | ENSLCRP00005032635 | 93.9948 | 92.6893 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 78.5877 | 76.3098 | maylandia_zebra | ENSMZEP00005021847 | 90.7895 | 88.1579 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 80.41 | 78.8155 | amphiprion_percula | ENSAPEP00000011568 | 92.6509 | 90.8137 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 79.0433 | 77.4487 | cottoperca_gobio | ENSCGOP00000038405 | 87.6263 | 85.8586 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 67.426 | 65.8314 | amphiprion_ocellaris | ENSAOCP00000016042 | 92.79 | 90.5956 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 80.1822 | 78.1321 | mastacembelus_armatus | ENSMAMP00000051012 | 91.906 | 89.5561 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 81.7768 | 79.2711 | anabas_testudineus | ENSATEP00000046428 | 93.7337 | 90.8616 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 79.2711 | 76.7654 | hippocampus_comes | ENSHCOP00000016961 | 90.8616 | 87.9896 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 81.549 | 80.1822 | labrus_bergylta | ENSLBEP00000022251 | 93.4726 | 91.906 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 80.8656 | 78.8155 | stegastes_partitus | ENSSPAP00000022015 | 93.1758 | 90.8137 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 80.6378 | 78.3599 | scophthalmus_maximus | ENSSMAP00000021415 | 92.6702 | 90.0524 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 81.7768 | 79.2711 | oryzias_javanicus | ENSOJAP00000016305 | 85.6802 | 83.0549 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 79.0433 | 76.3098 | cynoglossus_semilaevis | ENSCSEP00000029517 | 91.3158 | 88.1579 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 78.8155 | 76.7654 | seriola_lalandi_dorsalis | ENSSLDP00000028841 | 89.8701 | 87.5325 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 79.2711 | 75.8542 | takifugu_rubripes | ENSTRUP00000081728 | 91.0995 | 87.1728 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 81.3212 | 78.8155 | oryzias_sinensis | ENSOSIP00000005550 | 82.448 | 79.9076 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 80.8656 | 78.5877 | oryzias_melastigma | ENSOMEP00000009362 | 93.1758 | 90.5512 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 78.3599 | 76.7654 | betta_splendens | ENSBSLP00000036093 | 89.5833 | 87.7604 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 81.0934 | 79.0433 | sander_lucioperca | ENSSLUP00000037440 | 92.9504 | 90.6005 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 80.6378 | 77.4487 | gasterosteus_aculeatus | ENSGACP00000014234 | 92.4282 | 88.7728 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 36.9021 | 25.7403 | caenorhabditis_elegans | T07D1.4d.1 | 37.7622 | 26.3403 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 43.7358 | 34.6241 | drosophila_melanogaster | FBpp0293630 | 19.9584 | 15.8004 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 43.9636 | 35.3075 | ciona_intestinalis | ENSCINP00000025341 | 43.0804 | 34.5982 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 75.6264 | 70.615 | clupea_harengus | ENSCHAP00000027363 | 85.347 | 79.6915 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.5376 | 72.8929 | danio_rerio | ENSDARP00000016637 | 87.9581 | 83.7696 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 75.8542 | 69.9317 | carassius_auratus | ENSCARP00000082480 | 87.8628 | 81.0026 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 75.8542 | 69.9317 | carassius_auratus | ENSCARP00000062697 | 87.8628 | 81.0026 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 71.0706 | 66.7426 | carassius_auratus | ENSCARP00000033068 | 84.3243 | 79.1892 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 77.221 | 70.8428 | ictalurus_punctatus | ENSIPUP00000000045 | 72.2814 | 66.3113 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 77.4487 | 74.2597 | astyanax_mexicanus | ENSAMXP00000010801 | 89.0052 | 85.3403 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.5376 | 71.754 | electrophorus_electricus | ENSEEEP00000015272 | 87.9581 | 82.4607 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.5376 | 72.4374 | esox_lucius | ENSELUP00000015079 | 86.1538 | 81.5385 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 68.1093 | 62.4146 | oncorhynchus_kisutch | ENSOKIP00005025492 | 43.586 | 39.9417 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 77.221 | 72.8929 | oncorhynchus_kisutch | ENSOKIP00005006715 | 87.3711 | 82.4742 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.3098 | 72.6651 | oncorhynchus_mykiss | ENSOMYP00000004295 | 88.1579 | 83.9474 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 77.221 | 72.6651 | oncorhynchus_mykiss | ENSOMYP00000004213 | 88.7435 | 83.5079 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 74.2597 | 69.4761 | salmo_salar | ENSSSAP00000175756 | 77.0686 | 72.104 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 74.2597 | 69.7039 | salmo_salar | ENSSSAP00000018129 | 86.4721 | 81.1671 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.9932 | 72.8929 | salmo_trutta | ENSSTUP00000001042 | 86.8895 | 82.2622 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 77.4487 | 72.8929 | salmo_trutta | ENSSTUP00000035624 | 86.514 | 81.4249 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.9932 | 72.4374 | gadus_morhua | ENSGMOP00000005350 | 88.7139 | 83.4646 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 56.2642 | 48.5194 | chrysemys_picta_bellii | ENSCPBP00000014735 | 68.6111 | 59.1667 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 51.0251 | 44.4191 | laticauda_laticaudata | ENSLLTP00000002811 | 69.7819 | 60.7477 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.3098 | 72.8929 | pygocentrus_nattereri | ENSPNAP00000025962 | 87.4674 | 83.5509 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 57.1754 | 49.4305 | anolis_carolinensis | ENSACAP00000009830 | 69.5291 | 60.1108 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 58.7699 | 51.0251 | erpetoichthys_calabaricus | ENSECRP00000033665 | 73.5043 | 63.8177 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 74.9431 | 71.5262 | paramormyrops_kingsleyae | ENSPKIP00000031672 | 85.6771 | 81.7708 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 57.4032 | 49.6583 | salvator_merianae | ENSSMRP00000026562 | 70 | 60.5556 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.7654 | 72.6651 | denticeps_clupeoides | ENSDCDP00000002223 | 89.3899 | 84.6154 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 57.1754 | 49.4305 | podarcis_muralis | ENSPMRP00000017805 | 65.3646 | 56.5104 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 57.8588 | 52.164 | hucho_hucho | ENSHHUP00000078586 | 72.7794 | 65.616 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 77.4487 | 73.1207 | hucho_hucho | ENSHHUP00000047606 | 87.6289 | 82.732 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 29.8405 | 23.0068 | ciona_savignyi | ENSCSAVP00000009805 | 46.4539 | 35.8156 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 75.6264 | 70.8428 | cyprinus_carpio_carpio | ENSCCRP00000008790 | 86.911 | 81.4136 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.7654 | 72.2096 | cyprinus_carpio_carpio | ENSCCRP00000159734 | 88.2199 | 82.9843 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.082 | 74.4875 | myripristis_murdjan | ENSMMDP00005019907 | 92.5208 | 90.5817 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.7654 | 72.4374 | scleropages_formosus | ENSSFOP00015000931 | 88.4514 | 83.4646 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 71.0706 | 66.9704 | sinocyclocheilus_grahami | ENSSGRP00000000694 | 87.8873 | 82.8169 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 76.082 | 71.5262 | sinocyclocheilus_grahami | ENSSGRP00000024183 | 88.3598 | 83.0688 |
| ENSDLAG00005002149 | dicentrarchus_labrax | ENSDLAP00005078033 | 57.8588 | 53.5308 | oncorhynchus_tshawytscha | ENSOTSP00005090962 | 84.106 | 77.8146 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
