RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSDLAG00005001899	Gene ID		Accession	-
Symbol	si	Alias	-	Full Name	si:dkey-86e18.1
Status	Confidence	Length	8208 bases	Strand	Minus strand
Position	CAJNNU010000018.1 : 21892178 - 21900385	RNA binding domain	Isy1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSDLAP00005004196	Isy1	PF06246	1.3e-08	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
si:dkey-86e18.1-201	ENSDLAT00005004342	5034	350aa	ENSDLAP00005004196

Gene Model

Click here to download ENSDLAG00005001899's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSDLAG00005001899's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDLAG00005001899

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	59.4286	50.2857	fundulus_heteroclitus	ENSFHEP00000000223	67.5325	57.1429
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	55.7143	48.8571	poecilia_reticulata	ENSPREP00000002880	61.5142	53.9432
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	60.2857	50.2857	xiphophorus_maculatus	ENSXMAP00000011423	69.4079	57.8947
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	43.4286	38.2857	cyclopterus_lumpus	ENSCLMP00005026862	70.6977	62.3256
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	49.1429	44	cyclopterus_lumpus	ENSCLMP00005026866	74.4589	66.6667
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	63.7143	56.8571	haplochromis_burtoni	ENSHBUP00000016294	77.972	69.5804
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	64	56.8571	astatotilapia_calliptera	ENSACLP00000017991	78.3217	69.5804
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	56.5714	47.1429	oryzias_latipes	ENSORLP00000026499	64.7059	53.9216
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	63.7143	56.8571	oreochromis_niloticus	ENSONIP00000040749	78.7986	70.318
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	69.1429	63.4286	sparus_aurata	ENSSAUP00010020899	82.0339	75.2542
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	60.5714	57.1429	lates_calcarifer	ENSLCAP00010017655	84.4622	79.6813
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	65.4286	56.5714	kryptolebias_marmoratus	ENSKMAP00000011161	74.5928	64.4951
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	61.1429	51.7143	poecilia_formosa	ENSPFOP00000014508	70.3947	59.5395
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	70	63.7143	acanthochromis_polyacanthus	ENSAPOP00000001501	77.7778	70.7936
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	58.2857	55.4286	amphilophus_citrinellus	ENSACIP00000010036	81.6	77.6
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	71.7143	64.5714	seriola_dumerili	ENSSDUP00000000995	78.9308	71.0692
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	58.2857	53.1429	neolamprologus_brichardi	ENSNBRP00000031082	81.9277	74.6988
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	61.4286	53.4286	nothobranchius_furzeri	ENSNFUP00015040707	70.9571	61.7162
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	61.1429	51.4286	poecilia_latipinna	ENSPLAP00000007541	70.3947	59.2105
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	64	56.5714	pundamilia_nyererei	ENSPNYP00000009840	78.3217	69.2308
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	53.4286	43.1429	cyprinodon_variegatus	ENSCVAP00000031087	53.125	42.8977
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	72.8571	66.8571	larimichthys_crocea	ENSLCRP00005048956	78.2209	71.7791
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	64	56.8571	maylandia_zebra	ENSMZEP00005026075	78.3217	69.5804
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	68	60.8571	amphiprion_percula	ENSAPEP00000016554	78.2895	70.0658
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	73.4286	69.1429	cottoperca_gobio	ENSCGOP00000003309	81.3291	76.5823
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	59.1429	53.1429	amphiprion_ocellaris	ENSAOCP00000010212	83.4677	75
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	68	60.2857	mastacembelus_armatus	ENSMAMP00000063006	75.5556	66.9841
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	66.8571	59.1429	anabas_testudineus	ENSATEP00000026044	78.7879	69.697
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	46.5714	38	hippocampus_comes	ENSHCOP00000014560	61.5094	50.1887
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	58.2857	46.5714	labrus_bergylta	ENSLBEP00000010421	73.6462	58.8448
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	68.5714	61.7143	stegastes_partitus	ENSSPAP00000019487	77.9221	70.1299
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	66.2857	59.7143	scophthalmus_maximus	ENSSMAP00000028848	74.359	66.9872
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	58.2857	48.2857	oryzias_javanicus	ENSOJAP00000008950	67.1053	55.5921
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	56.8571	49.1429	cynoglossus_semilaevis	ENSCSEP00000011614	68.8581	59.5156
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	72	64.2857	seriola_lalandi_dorsalis	ENSSLDP00000000253	78.9969	70.5329
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	58.5714	51.7143	takifugu_rubripes	ENSTRUP00000058398	74.2754	65.5797
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	57.1429	47.1429	oryzias_sinensis	ENSOSIP00000010002	65.3595	53.9216
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	59.7143	48.2857	oryzias_melastigma	ENSOMEP00000000888	68.9769	55.7756
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	58.8571	50.2857	betta_splendens	ENSBSLP00000020917	63.7771	54.4892
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	74.2857	69.4286	sander_lucioperca	ENSSLUP00000051989	85.2459	79.6721
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	31.4286	21.4286	callorhinchus_milii	ENSCMIP00000047508	52.1327	35.545
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	43.7143	31.1429	latimeria_chalumnae	ENSLACP00000004415	55.6364	39.6364
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	47.4286	36.5714	lepisosteus_oculatus	ENSLOCP00000010842	63.6015	49.0421
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	46.5714	37.7143	danio_rerio	ENSDARP00000063916	63.6719	51.5625
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	45.7143	38	carassius_auratus	ENSCARP00000109213	59.7015	49.6269
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	48.8571	39.4286	ictalurus_punctatus	ENSIPUP00000018012	65.7692	53.0769
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	44.2857	33.7143	astyanax_mexicanus	ENSAMXP00000038881	53.8194	40.9722
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	53.1429	44.8571	esox_lucius	ENSELUP00000006344	62.4161	52.6846
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	59.4286	48.8571	oncorhynchus_kisutch	ENSOKIP00005032665	58.1006	47.7654
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	50	43.4286	oncorhynchus_mykiss	ENSOMYP00000069877	71.4286	62.0408
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	54.8571	47.1429	salmo_salar	ENSSSAP00000056768	65.529	56.314
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	55.7143	48.2857	salmo_trutta	ENSSTUP00000005012	66.5529	57.6792
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	40.5714	34	gadus_morhua	ENSGMOP00000022898	66.9811	56.1321
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	48	40	pygocentrus_nattereri	ENSPNAP00000023490	65.1163	54.2636
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	45.1429	31.7143	erpetoichthys_calabaricus	ENSECRP00000025919	56.0284	39.3617
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	42.5714	35.4286	paramormyrops_kingsleyae	ENSPKIP00000027532	63.1356	52.5424
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	43.7143	33.4286	leptobrachium_leishanense	ENSLLEP00000045358	59.3023	45.3488
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	55.1429	47.7143	hucho_hucho	ENSHHUP00000054092	65.2027	56.4189
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	45.4286	37.4286	cyprinus_carpio_carpio	ENSCCRP00000103366	59.5506	49.0637
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	69.1429	61.7143	myripristis_murdjan	ENSMMDP00005029580	68.3616	61.0169
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	46.8571	37.4286	scleropages_formosus	ENSSFOP00015041684	59.6364	47.6364
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	46.8571	37.4286	scleropages_formosus	ENSSFOP00015050610	59.6364	47.6364
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	40.2857	32	sinocyclocheilus_grahami	ENSSGRP00000006548	63.2287	50.2242
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	46	37.1429	sinocyclocheilus_grahami	ENSSGRP00000069853	60.0746	48.5075
ENSDLAG00005001899	dicentrarchus_labrax	ENSDLAP00005004196	55.4286	48.2857	oncorhynchus_tshawytscha	ENSOTSP00005079409	66.2116	57.6792

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression