RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSDCDG00000027151	Gene ID		Accession	-
Symbol		Alias	-	Full Name	ribosomal protein S26, like
Status	Confidence	Length	1254 bases	Strand	Minus strand
Position	14 : 10138966 - 10140219	RNA binding domain	Ribosomal_S26e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSDCDP00000041813	Ribosomal_S26e	PF01283	7.2e-32	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSDCDT00000052838	243	80aa	ENSDCDP00000041813

Gene Model

Click here to download ENSDCDG00000027151's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSDCDG00000027151's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000059760	38.0952	35.7143	denticeps_clupeoides	ENSDCDP00000041813	80	75
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000029982	54.386	50.8772	denticeps_clupeoides	ENSDCDP00000041813	77.5	72.5

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	71.25	58.75	caenorhabditis_elegans	F39B2.6.1	48.7179	40.1709
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	76.25	63.75	drosophila_melanogaster	FBpp0312181	53.5088	44.7368
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	67.5	48.75	ciona_intestinalis	ENSCINP00000022141	45.3782	32.7731
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	72.5	eptatretus_burgeri	ENSEBUP00000027399	34.2246	31.016
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	callorhinchus_milii	ENSCMIP00000003330	56.0345	52.5862
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	carassius_auratus	ENSCARP00000128501	53.3333	50
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	carassius_auratus	ENSCARP00000131188	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	55	47.5	salmo_salar	ENSSSAP00000056639	35.2	30.4
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	75	gadus_morhua	ENSGMOP00000005042	56.5217	52.1739
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	73.75	fundulus_heteroclitus	ENSFHEP00000007065	53.3333	49.1667
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	75	poecilia_reticulata	ENSPREP00000018865	57.0175	52.6316
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	oryzias_latipes	ENSORLP00000001910	57.0175	53.5088
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	cyclopterus_lumpus	ENSCLMP00005022106	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	oreochromis_niloticus	ENSONIP00000024003	43.6242	40.9396
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	haplochromis_burtoni	ENSHBUP00000026012	43.6242	40.9396
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	astatotilapia_calliptera	ENSACLP00000036906	43.6242	40.9396
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	75	sparus_aurata	ENSSAUP00010046153	56.5217	52.1739
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	75	lates_calcarifer	ENSLCAP00010038689	56.5217	52.1739
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	75	xenopus_tropicalis	ENSXETP00000084273	54.6218	50.4202
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	72.5	72.5	notamacropus_eugenii	ENSMEUP00000002187	98.3051	98.3051
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	erinaceus_europaeus	ENSEEUP00000009888	62.5	58.6538
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	71.25	71.25	callithrix_jacchus	ENSCJAP00000088269	52.7778	52.7778
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	ursus_americanus	ENSUAMP00000018486	46.4286	43.5714
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	canis_lupus_familiaris	ENSCAFP00845008417	53.719	50.4132
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	panthera_leo	ENSPLOP00000010920	54.7009	51.2821
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	delphinapterus_leucas	ENSDLEP00000008579	34.2246	32.0856
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	equus_caballus	ENSECAP00000021737	44.2177	41.4966
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	73.75	oryctolagus_cuniculus	ENSOCUP00000020315	37.1429	33.7143
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	urocitellus_parryii	ENSUPAP00010019252	54.6218	51.2605
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	73.75	68.75	mesocricetus_auratus	ENSMAUP00000013243	63.4409	59.1398
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	76.25	octodon_degus	ENSODEP00000025736	64.6465	61.6162
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	75	70	dicentrarchus_labrax	ENSDLAP00005011862	54.0541	50.4505
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	anolis_carolinensis	ENSACAP00000005170	38.0952	35.7143
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	78.75	75	vombatus_ursinus	ENSVURP00010031019	52.0661	49.5868
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	73.75	cyprinodon_variegatus	ENSCVAP00000000376	49.6124	45.7364
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	75	70	takifugu_rubripes	ENSTRUP00000030482	54.0541	50.4505
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	oryzias_melastigma	ENSOMEP00000008366	47.0588	44.1176
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	78.75	72.5	naja_naja	ENSNNAP00000002046	44.3662	40.8451
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	neolamprologus_brichardi	ENSNBRP00000022266	31.2195	29.2683
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	kryptolebias_marmoratus	ENSKMAP00000026273	46.3768	43.4783
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	76.25	phascolarctos_cinereus	ENSPCIP00000043610	49.2308	46.9231
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	seriola_dumerili	ENSSDUP00000010222	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	76.25	73.75	geospiza_fortis	ENSGFOP00000006655	67.033	64.8352
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	75	poecilia_formosa	ENSPFOP00000001551	56.5217	52.1739
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	75	poecilia_latipinna	ENSPLAP00000027184	56.5217	52.1739
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	67.5	47.5	ciona_savignyi	ENSCSAVP00000006313	45.3782	31.9328
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	scophthalmus_maximus	ENSSMAP00000070672	55.6522	52.1739
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	taeniopygia_guttata	ENSTGUP00000031990	29.2237	27.3973
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	taeniopygia_guttata	ENSTGUP00000021255	46.0432	43.1655
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	72.5	72.5	ficedula_albicollis	ENSFALP00000020802	42.029	42.029
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	73.75	labrus_bergylta	ENSLBEP00000024990	55.6522	51.3043
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	amphilophus_citrinellus	ENSACIP00000029656	57.0175	53.5088
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	anabas_testudineus	ENSATEP00000066817	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	gasterosteus_aculeatus	ENSGACP00000000955	55.6522	52.1739
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	bos_mutus	ENSBMUP00000023017	40	37.5
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	amphiprion_ocellaris	ENSAOCP00000004163	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	hippocampus_comes	ENSHCOP00000018716	57.0175	53.5088
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	nothobranchius_furzeri	ENSNFUP00015021407	55.6522	52.1739
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	tetraodon_nigroviridis	ENSTNIP00000017621	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	amphiprion_percula	ENSAPEP00000022814	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	betta_splendens	ENSBSLP00000039733	53.7815	50.4202
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	mastacembelus_armatus	ENSMAMP00000060143	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	78.75	72.5	carlito_syrichta	ENSTSYP00000021290	55.2632	50.8772
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	71.25	71.25	struthio_camelus_australis	ENSSCUP00000025118	50	50
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	75	seriola_lalandi_dorsalis	ENSSLDP00000032818	55.5556	51.2821
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	sander_lucioperca	ENSSLUP00000040919	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	80	75	pundamilia_nyererei	ENSPNYP00000002279	47.4074	44.4444
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	strigops_habroptila	ENSSHBP00005017009	35.7143	33.5165
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	oryzias_sinensis	ENSOSIP00000019396	39.1566	36.747
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	63.75	61.25	terrapene_carolina_triunguis	ENSTMTP00000009486	45.1327	43.3628
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	nannospalax_galili	ENSNGAP00000005162	54.6218	51.2605
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	73.75	56.25	saccharomyces_cerevisiae	YER131W	49.5798	37.8151
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	73.75	56.25	saccharomyces_cerevisiae	YGL189C	49.5798	37.8151
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	larimichthys_crocea	ENSLCRP00005009509	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	oryzias_javanicus	ENSOJAP00000004472	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	cynoglossus_semilaevis	ENSCSEP00000005492	56.5217	53.0435
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	75	68.75	leptobrachium_leishanense	ENSLLEP00000015127	54.0541	49.5495
ENSDCDG00000027151	denticeps_clupeoides	ENSDCDP00000041813	81.25	76.25	leptobrachium_leishanense	ENSLLEP00000020595	42.2078	39.6104

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression