RBP Type
N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq
Ensembl ID ENSDARG00000021702 Gene ID
406261 Accession
-
Symbol
pdcd4a
Alias
zgc:66311;wu:fa55g03;wu:fb08a11;wu:fe01a02
Full Name
programmed cell death 4a
Status
Confidence
Length
25388 bases
Strand
Minus strand
Position
1 : 26046148 - 26071535
RNA binding domain
MA3
Summary
Predicted to act upstream of or within negative regulation of transcription, DNA-templated. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including head; immature eye; midbrain; neural plate; and segmental plate. Orthologous to human PDCD4 (programmed cell death 4). [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSDARP00000131636
MA3
PF02847 3.5e-43
1
ENSDARP00000131636
MA3
PF02847 3.5e-43
2
ENSDARP00000147026
MA3
PF02847 3.5e-43
1
ENSDARP00000147026
MA3
PF02847 3.5e-43
2
ENSDARP00000148546
MA3
PF02847 3.5e-43
1
ENSDARP00000148546
MA3
PF02847 3.5e-43
2
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
pdcd4a-201
ENSDART00000168640
2853
467aa
ENSDARP00000131636
pdcd4a-202
ENSDART00000171752
901
No protein
-
pdcd4a-203
ENSDART00000185187
1524
467aa
ENSDARP00000147026
pdcd4a-204
ENSDART00000185348
2620
467aa
ENSDARP00000148546
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSDARG00000021702 danio_rerio ENSDARP00000002420 74.0426 60.6383 danio_rerio ENSDARP00000131636 74.5182 61.0278
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSDARG00000021702 danio_rerio ENSDARP00000131636 59.5289 42.8266 drosophila_melanogaster FBpp0304100 54.6169 39.2927 ENSDARG00000021702 danio_rerio ENSDARP00000131636 54.1756 40.4711 ciona_intestinalis ENSCINP00000024343 54.1756 40.4711 ENSDARG00000021702 danio_rerio ENSDARP00000131636 26.1242 20.985 petromyzon_marinus ENSPMAP00000004462 66.3043 53.2609 ENSDARG00000021702 danio_rerio ENSDARP00000131636 70.6638 55.8887 eptatretus_burgeri ENSEBUP00000015153 76.9231 60.8392 ENSDARG00000021702 danio_rerio ENSDARP00000131636 71.3062 57.1734 callorhinchus_milii ENSCMIP00000048509 73.5099 58.9404 ENSDARG00000021702 danio_rerio ENSDARP00000131636 41.3276 35.3319 latimeria_chalumnae ENSLACP00000001540 79.0984 67.6229 ENSDARG00000021702 danio_rerio ENSDARP00000131636 66.5953 59.5289 lepisosteus_oculatus ENSLOCP00000002810 86.8715 77.6536 ENSDARG00000021702 danio_rerio ENSDARP00000131636 91.2206 83.7259 clupea_harengus ENSCHAP00000062612 88.3817 81.1203 ENSDARG00000021702 danio_rerio ENSDARP00000131636 60.5996 49.2505 anas_platyrhynchos_platyrhynchos ENSAPLP00000023695 69.5332 56.5111 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.7216 81.3705 esox_lucius ENSELUP00000025635 86.3918 78.3505 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.7216 80.5139 haplochromis_burtoni ENSHBUP00000008992 90.1075 80.8602 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.4368 79.4433 ictalurus_punctatus ENSIPUP00000003232 88.0597 79.1045 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.1499 80.5139 oreochromis_niloticus ENSONIP00000068778 90.5376 80.8602 ENSDARG00000021702 danio_rerio ENSDARP00000131636 79.4433 66.8094 xenopus_tropicalis ENSXETP00000117887 78.9362 66.383 ENSDARG00000021702 danio_rerio ENSDARP00000131636 80.9422 70.0214 pseudonaja_textilis ENSPTXP00000025674 78.9144 68.2672 ENSDARG00000021702 danio_rerio ENSDARP00000131636 81.1563 70.4497 chrysemys_picta_bellii ENSCPBP00000035078 82.5708 71.6776 ENSDARG00000021702 danio_rerio ENSDARP00000131636 85.2248 75.803 poecilia_reticulata ENSPREP00000008243 91.7051 81.5668 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.5782 79.8715 cyclopterus_lumpus ENSCLMP00005022183 90.5782 79.8715 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.651 78.5867 oryzias_latipes ENSORLP00000008059 89.6104 79.4372 ENSDARG00000021702 danio_rerio ENSDARP00000131636 91.4347 83.0835 astyanax_mexicanus ENSAMXP00000027799 91.2393 82.906 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.364 82.0128 oncorhynchus_kisutch ENSOKIP00005042074 90.364 82.0128 ENSDARG00000021702 danio_rerio ENSDARP00000131636 86.5096 78.3726 oncorhynchus_kisutch ENSOKIP00005053129 86.6953 78.5408 ENSDARG00000021702 danio_rerio ENSDARP00000131636 94.2184 89.9358 carassius_auratus ENSCARP00000050402 92.6316 88.4211 ENSDARG00000021702 danio_rerio ENSDARP00000131636 81.1563 70.2355 naja_naja ENSNNAP00000022829 80.4671 69.6391 ENSDARG00000021702 danio_rerio ENSDARP00000131636 76.6595 66.3812 anolis_carolinensis ENSACAP00000000444 86.2651 74.6988 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.9358 81.3705 oncorhynchus_mykiss ENSOMYP00000017298 90.7127 82.0734 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.1499 81.7987 oncorhynchus_mykiss ENSOMYP00000035416 90.1499 81.7987 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.5075 77.3019 cyprinodon_variegatus ENSCVAP00000001991 89.5075 77.3019 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.5075 80.2998 neolamprologus_brichardi ENSNBRP00000017031 89.8925 80.6452 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.8651 79.6574 erpetoichthys_calabaricus ENSECRP00000026162 89.8268 80.5195 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.7216 81.7987 electrophorus_electricus ENSEEEP00000037111 90.6926 82.684 ENSDARG00000021702 danio_rerio ENSDARP00000131636 76.8737 64.0257 gallus_gallus ENSGALP00010008623 77.2043 64.3011 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.2934 77.5161 fundulus_heteroclitus ENSFHEP00000034087 89.2934 77.5161 ENSDARG00000021702 danio_rerio ENSDARP00000131636 80.9422 70.0214 notechis_scutatus ENSNSUP00000004232 79.0795 68.41 ENSDARG00000021702 danio_rerio ENSDARP00000131636 85.8672 77.0878 lates_calcarifer ENSLCAP00010007382 91.5525 82.1918 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.1499 81.7987 salmo_trutta ENSSTUP00000105417 90.1499 81.7987 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.0086 80.2998 salmo_trutta ENSSTUP00000037773 87.0763 79.4492 ENSDARG00000021702 danio_rerio ENSDARP00000131636 81.1563 69.8073 podarcis_muralis ENSPMRP00000025356 74.9012 64.4269 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.2934 77.7302 xiphophorus_maculatus ENSXMAP00000005502 89.2934 77.7302 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.2934 77.9443 poecilia_latipinna ENSPLAP00000012609 89.2934 77.9443 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.2227 79.2291 gadus_morhua ENSGMOP00000034523 88.9849 79.9136 ENSDARG00000021702 danio_rerio ENSDARP00000131636 87.3662 78.1585 takifugu_rubripes ENSTRUP00000062595 88.8889 79.5207 ENSDARG00000021702 danio_rerio ENSDARP00000131636 91.6488 81.3705 anabas_testudineus ENSATEP00000023430 91.453 81.1966 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.2934 77.7302 poecilia_formosa ENSPFOP00000011869 89.2934 77.7302 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.2227 77.7302 hippocampus_comes ENSHCOP00000016530 88.0342 77.5641 ENSDARG00000021702 danio_rerio ENSDARP00000131636 53.1049 40.8994 ciona_savignyi ENSCSAVP00000008424 53.913 41.5217 ENSDARG00000021702 danio_rerio ENSDARP00000131636 91.863 80.5139 sparus_aurata ENSSAUP00010044805 91.6667 80.3419 ENSDARG00000021702 danio_rerio ENSDARP00000131636 80.9422 70.0214 laticauda_laticaudata ENSLLTP00000017351 79.0795 68.41 ENSDARG00000021702 danio_rerio ENSDARP00000131636 86.0814 76.2313 nothobranchius_furzeri ENSNFUP00015015117 84.2767 74.6331 ENSDARG00000021702 danio_rerio ENSDARP00000131636 37.045 31.0492 chelonoidis_abingdonii ENSCABP00000025918 53.3951 44.7531 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.4368 79.6574 amphilophus_citrinellus ENSACIP00000026567 91.3717 82.3009 ENSDARG00000021702 danio_rerio ENSDARP00000131636 79.8715 68.9508 salvator_merianae ENSSMRP00000019492 84.1986 72.6862 ENSDARG00000021702 danio_rerio ENSDARP00000131636 52.6767 43.6831 anser_brachyrhynchus ENSABRP00000025169 80.6557 66.8852 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.1499 78.3726 scophthalmus_maximus ENSSMAP00000053049 89.9573 78.2051 ENSDARG00000021702 danio_rerio ENSDARP00000131636 80.9422 69.5931 gopherus_evgoodei ENSGEVP00005029677 83.6283 71.9027 ENSDARG00000021702 danio_rerio ENSDARP00000131636 79.6574 68.9508 gopherus_evgoodei ENSGEVP00005022892 87.1194 75.4098 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.7923 81.1563 labrus_bergylta ENSLBEP00000027407 91.5767 81.8575 ENSDARG00000021702 danio_rerio ENSDARP00000131636 95.0749 91.0064 sinocyclocheilus_grahami ENSSGRP00000030132 92.1162 88.1743 ENSDARG00000021702 danio_rerio ENSDARP00000131636 91.0064 79.2291 kryptolebias_marmoratus ENSKMAP00000001416 90.812 79.0598 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.5782 82.227 hucho_hucho ENSHHUP00000074154 90.1919 81.8763 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.7216 82.0128 hucho_hucho ENSHHUP00000089583 90.1075 82.3656 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.2227 79.6574 myripristis_murdjan ENSMMDP00005021105 87.8465 79.3177 ENSDARG00000021702 danio_rerio ENSDARP00000131636 91.0064 81.5846 sander_lucioperca ENSSLUP00000052529 90.812 81.4103 ENSDARG00000021702 danio_rerio ENSDARP00000131636 86.2955 77.0878 tetraodon_nigroviridis ENSTNIP00000021210 89.1593 79.646 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.7216 79.8715 acanthochromis_polyacanthus ENSAPOP00000031120 91.4847 81.441 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.364 78.5867 cottoperca_gobio ENSCGOP00000022587 90.1709 78.4188 ENSDARG00000021702 danio_rerio ENSDARP00000131636 76.8737 65.9529 leptobrachium_leishanense ENSLLEP00000029869 54.2296 46.5257 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.9358 79.2291 gasterosteus_aculeatus ENSGACP00000023265 89.7436 79.0598 ENSDARG00000021702 danio_rerio ENSDARP00000131636 91.4347 79.8715 larimichthys_crocea ENSLCRP00005012245 91.2393 79.7009 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.7216 80.5139 pundamilia_nyererei ENSPNYP00000012373 90.1075 80.8602 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.9358 80.0857 amphiprion_ocellaris ENSAOCP00000002266 91.7031 81.6594 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.7216 80.5139 astatotilapia_calliptera ENSACLP00000031085 90.1075 80.8602 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.5782 79.2291 cynoglossus_semilaevis ENSCSEP00000004475 90.3846 79.0598 ENSDARG00000021702 danio_rerio ENSDARP00000131636 83.5118 74.0899 oryzias_javanicus ENSOJAP00000010570 82.8026 73.4607 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.364 82.0128 oncorhynchus_tshawytscha ENSOTSP00005010049 90.364 82.0128 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.7216 81.3705 oncorhynchus_tshawytscha ENSOTSP00005048064 90.4968 82.0734 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.364 82.0128 oncorhynchus_tshawytscha ENSOTSP00005043071 90.364 82.0128 ENSDARG00000021702 danio_rerio ENSDARP00000131636 91.4347 81.7987 seriola_dumerili ENSSDUP00000003360 91.2393 81.6239 ENSDARG00000021702 danio_rerio ENSDARP00000131636 83.94 75.1606 scleropages_formosus ENSSFOP00015052828 84.1202 75.3219 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.8651 76.2313 scleropages_formosus ENSSFOP00015029483 88.4861 75.9062 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.7216 77.3019 paramormyrops_kingsleyae ENSPKIP00000030815 90.3017 77.8017 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.9358 80.7281 paramormyrops_kingsleyae ENSPKIP00000040446 90.5172 81.25 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.7923 80.2998 dicentrarchus_labrax ENSDLAP00005016811 90.7923 80.2998 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.7216 80.5139 maylandia_zebra ENSMZEP00005026523 90.1075 80.8602 ENSDARG00000021702 danio_rerio ENSDARP00000131636 91.2206 80.9422 mastacembelus_armatus ENSMAMP00000024090 91.0256 80.7692 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.2227 78.8009 oryzias_melastigma ENSOMEP00000025568 89.1775 79.6537 ENSDARG00000021702 danio_rerio ENSDARP00000131636 92.0771 83.7259 pygocentrus_nattereri ENSPNAP00000005419 91.8803 83.547 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.9358 80.5139 stegastes_partitus ENSSPAP00000000777 91.7031 82.0961 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.4368 78.3726 oryzias_sinensis ENSOSIP00000025977 89.3939 79.2208 ENSDARG00000021702 danio_rerio ENSDARP00000131636 90.1499 81.5846 salmo_salar ENSSSAP00000042705 90.1499 81.5846 ENSDARG00000021702 danio_rerio ENSDARP00000131636 88.651 80.9422 salmo_salar ENSSSAP00000073934 86.0707 78.5863 ENSDARG00000021702 danio_rerio ENSDARP00000131636 92.5054 85.2248 denticeps_clupeoides ENSDCDP00000017185 84.7059 78.0392 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.2934 79.015 betta_splendens ENSBSLP00000000030 84.9287 75.1527 ENSDARG00000021702 danio_rerio ENSDARP00000131636 89.9358 80.0857 amphiprion_percula ENSAPEP00000021196 91.7031 81.6594 ENSDARG00000021702 danio_rerio ENSDARP00000131636 91.4347 81.7987 seriola_lalandi_dorsalis ENSSLDP00000021182 91.2393 81.6239 ENSDARG00000021702 danio_rerio ENSDARP00000131636 93.7902 88.651 cyprinus_carpio_carpio ENSCCRP00000165903 89.5705 84.6626
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005634 is_active_in nucleus 1 IBA Danio_rerio(7955) Component GO:0005829 is_active_in cytosol 1 IBA Danio_rerio(7955) Component GO:0045892 acts_upstream_of_or_within negative regulation of DNA-templated transcription 1 IEA Danio_rerio(7955) Process
Copyright © 2023, Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.
