Description

Ensembl ID ENSCVAG00000004811 Gene ID 107086527 Accession -
Symbol rps27a Alias - Full Name ribosomal protein S27a
Status Confidence Length 3420 bases Strand Minus strand
Position KL652656.1 : 1006484 - 1009903 RNA binding domain Ribosomal_S27
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCVAP00000003612 Ribosomal_S27 PF01599 6.3e-25 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
rps27a-201 ENSCVAT00000009752 902 181aa ENSCVAP00000003612

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000002546234.838719.3548cyprinodon_variegatusENSCVAP0000000361229.834316.5746
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000001146311.01937.43802cyprinodon_variegatusENSCVAP0000000361244.198929.8343
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000495171.111152.2222cyprinodon_variegatusENSCVAP0000000361235.359125.9669
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000816172.289254.2169cyprinodon_variegatusENSCVAP0000000361233.149224.8619
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000002555974.218867.9688cyprinodon_variegatusENSCVAP0000000361252.486248.0663
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000320456.842132.6316cyprinodon_variegatusENSCVAP0000000361229.834317.1271
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000320956.842132.6316cyprinodon_variegatusENSCVAP0000000361229.834317.1271
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000313535.62520cyprinodon_variegatusENSCVAP0000000361231.491717.6796
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000272680.208376.0417cyprinodon_variegatusENSCVAP0000000361242.541440.3315
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000002166777.108474.6988cyprinodon_variegatusENSCVAP0000000361235.359134.2541

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878poecilia_reticulataENSPREP00000018427100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878xiphophorus_maculatusENSXMAP00000000166100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878fundulus_heteroclitusENSFHEP00000000453100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361271.823268.5083oryzias_latipesENSORLP0000003818966.666763.5897
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878cyclopterus_lumpusENSCLMP00005021678100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878oreochromis_niloticusENSONIP00000020250100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361288.397887.8453sparus_aurataENSSAUP0001006271381.632781.1225
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878haplochromis_burtoniENSHBUP00000002167100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878lates_calcariferENSLCAP00010005493100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878poecilia_latipinnaENSPLAP00000025723100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878poecilia_formosaENSPFOP00000013174100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878seriola_dumeriliENSSDUP00000004225100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878acanthochromis_polyacanthusENSAPOP00000019340100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361285.635485.6354anabas_testudineusENSATEP0000005539999.35999.359
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361277.900677.3481dicentrarchus_labraxENSDLAP0000503616889.240588.6076
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878scophthalmus_maximusENSSMAP00000008032100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361260.22160.221amphilophus_citrinellusENSACIP0000000412698.198298.1982
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361281.215578.453oryzias_melastigmaENSOMEP0000002096680.327977.5956
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878neolamprologus_brichardiENSNBRP00000013855100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361276.243176.2431tetraodon_nigroviridisENSTNIP0000002186798.571498.5714
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878stegastes_partitusENSSPAP00000030287100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361288.950388.9503larimichthys_croceaENSLCRP0000503854778.536678.5366
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878hippocampus_comesENSHCOP00000016034100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878takifugu_rubripesENSTRUP00000027679100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878cynoglossus_semilaevisENSCSEP00000002392100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878amphiprion_perculaENSAPEP00000014448100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878labrus_bergyltaENSLBEP00000000668100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361276.243172.3757maylandia_zebraENSMZEP0000500578871.87568.2292
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361285.635485.6354betta_splendensENSBSLP0000003344199.35999.359
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361270.718269.6133pundamilia_nyerereiENSPNYP0000002653168.085167.0213
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878amphiprion_ocellarisENSAOCP00000002842100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361285.635485.6354oryzias_javanicusENSOJAP0000000461699.35999.359
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361285.635485.6354oryzias_sinensisENSOSIP0000001913899.35999.359
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878gasterosteus_aculeatusENSGACP0000001529098.734298.7342
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878mastacembelus_armatusENSMAMP00000033558100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361285.635485.6354nothobranchius_furzeriENSNFUP0001503441579.487279.4872
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878kryptolebias_marmoratusENSKMAP00000004139100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187885.6354cottoperca_gobioENSCGOP0000002790310099.359
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361282.872979.0055drosophila_melanogasterFBpp007960696.153891.6667
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361279.005576.2431ciona_intestinalisENSCINP0000001203792.258189.0323
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361265.193462.4309petromyzon_marinusENSPMAP0000000698097.520793.3884
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361284.530481.2155eptatretus_burgeriENSEBUP0000001153498.076994.2308
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361275.690674.0331callorhinchus_miliiENSCMIP0000000635686.163584.2767
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187884.5304latimeria_chalumnaeENSLACP0000000867810098.0769
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361287.292887.2928lepisosteus_oculatusENSLOCP0000001914697.530997.5309
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878clupea_harengusENSCHAP00000051395100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878danio_rerioENSDARP00000128775100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361267.955864.6409carassius_auratusENSCARP0000000036466.486563.2432
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878astyanax_mexicanusENSAMXP00000036637100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878ictalurus_punctatusENSIPUP00000022626100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878electrophorus_electricusENSEEEP00000009424100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878esox_luciusENSELUP00000028093100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361276.243174.5856oncorhynchus_kisutchENSOKIP0000502042782.142980.3571
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878oncorhynchus_mykissENSOMYP00000103614100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361272.375767.9558salmo_salarENSSSAP0000006000275.722571.0983
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361280.66379.558salmo_salarENSSSAP0000015559591.2590
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187885.6354salmo_truttaENSSTUP0000000343110099.359
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878gadus_morhuaENSGMOP00000012733100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361287.845385.0829notechis_scutatusENSNSUP0000002116293.529490.5882
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361241.988941.9889pseudonaja_textilisENSPTXP0000002172598.701398.7013
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361252.486247.5138anas_platyrhynchos_platyrhynchosENSAPLP0000002553668.840662.3188
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361281.76878.453gallus_gallusENSGALP0001002346963.519360.9442
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361281.76879.558parus_majorENSPMJP0000001922175.126973.0964
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361255.801155.2486erinaceus_europaeusENSEEUP0000000212299.019698.0392
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361254.696148.6188callithrix_jacchusENSCJAP0000008501046.919441.7062
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361285.635483.9779macaca_nemestrinaENSMNEP0000000589299.35997.4359
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361275.690675.1381mandrillus_leucophaeusENSMLEP0000000091499.275498.5507
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361284.530483.4254pan_paniscusENSPPAP0000000580098.076996.7949
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361285.635484.5304pan_troglodytesENSPTRP0000006041299.35998.0769
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187885.0829ailuropoda_melanoleucaENSAMEP0000002785210098.7179
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361243.093941.4365balaenoptera_musculusENSBMSP0001002499491.764788.2353
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361282.872979.558ovis_aries_rambouilletENSOARP0002002882896.774292.9032
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361267.955865.7459cricetulus_griseus_chok1gshdENSCGRP0000100621593.181890.1515
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361241.436541.4365mus_caroliMGP_CAROLIEiJ_P009144497.402697.4026
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361241.988941.9889mesocricetus_auratusENSMAUP0000000897798.701398.7013
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361241.988941.9889mus_musculusENSMUSP0000014141998.701398.7013
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361242.541439.2265mus_spicilegusENSMSIP0000002302690.588283.5294
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361240.88439.779rattus_norvegicusENSRNOP0000008055096.103993.5065
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361240.88439.779rattus_norvegicusENSRNOP0000008679196.103993.5065
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361241.988941.9889rattus_norvegicusENSRNOP0000009047398.701398.7013
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361240.88440.884rattus_norvegicusENSRNOP0000008676096.103996.1039
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361271.823271.2707octodon_degusENSODEP0000001295495.588294.8529
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361243.093940.3315cavia_porcellusENSCPOP0000001994870.270365.7658
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878erpetoichthys_calabaricusENSECRP00000026007100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361268.508364.0884ficedula_albicollisENSFALP0000002841652.76649.3617
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361259.11659.116microtus_ochrogasterENSMOCP00000000916100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361250.828746.4088chelonoidis_abingdoniiENSCABP0000001517876.033169.4215
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361248.066346.4088rhinopithecus_roxellanaENSRROP0000000329690.62587.5
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361276.795673.4807rhinolophus_ferrumequinumENSRFEP0001001302189.677485.8064
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361271.270769.0608ciona_savignyiENSCSAVP0000000226082.692380.1282
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361255.801155.2486tupaia_belangeriENSTBEP0000000398395.28394.3396
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361241.988941.9889microcebus_murinusENSMICP0000002126198.701398.7013
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361241.436540.884microcebus_murinusENSMICP0000002076097.402696.1039
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361275.690670.7182otolemur_garnettiiENSOGAP0000001973688.387182.5806
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361285.635484.5304carlito_syrichtaENSTSYP0000000077699.35998.0769
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878oncorhynchus_tshawytschaENSOTSP00005087150100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361254.143650.2762jaculus_jaculusENSJJAP0000000287583.760777.7778
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187885.6354paramormyrops_kingsleyaeENSPKIP0000000434710099.359
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878pygocentrus_nattereriENSPNAP00000008071100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361281.215580.663pteropus_vampyrusENSPVAP0000001554397.35196.6887
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361230.939229.2818podarcis_muralisENSPMRP0000002051186.153881.5385
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361244.198943.6464sciurus_vulgarisENSSVLP0000500773488.888987.7778
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361246.408843.0939ictidomys_tridecemlineatusENSSTOP0000003136688.421182.1053
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361239.226538.1215peromyscus_maniculatus_bairdiiENSPEMP0000002927393.421190.7895
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361241.988941.9889peromyscus_maniculatus_bairdiiENSPEMP0000002127598.701398.7013
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361285.082985.0829scleropages_formosusENSSFOP0001502761487.005787.0057
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361283.425481.2155moschus_moschiferusENSMMSP0000000050296.794994.2308
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878myripristis_murdjanENSMMDP00005027900100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361238.67434.2541vombatus_ursinusENSVURP0001002350983.333373.8095
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361259.668557.4586vombatus_ursinusENSVURP0001002362391.525488.1356
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361240.331540.3315prolemur_simusENSPSMP0000001831594.805294.8052
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361253.591250.2762nannospalax_galiliENSNGAP0000001111188.990883.4862
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361272.375769.0608saccharomyces_cerevisiaeYLR167W86.184282.2368
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361246.408846.4088rhinopithecus_bietiENSRBIP00000003802100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361234.254133.1492chinchilla_lanigeraENSCLAP0000001436380.519577.9221
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878sinocyclocheilus_grahamiENSSGRP00000081242100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361286.187886.1878hucho_huchoENSHHUP00000074872100100
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361278.45376.7956denticeps_clupeoidesENSDCDP0000004134790.445988.535
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361279.55879.0055denticeps_clupeoidesENSDCDP0000004489074.611474.0933
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361282.320479.0055cyprinus_carpio_carpioENSCCRP0000015062078.421175.2632
ENSCVAG00000004811cyprinodon_variegatusENSCVAP0000000361279.005578.453cyprinus_carpio_carpioENSCCRP0000014726286.144685.5422

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression