RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCVAG00000001592	Gene ID	107097357	Accession	-
Symbol	lsm6	Alias	-	Full Name	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Status	Confidence	Length	3479 bases	Strand	Minus strand
Position	KL653188.1 : 386911 - 390389	RNA binding domain	LSM
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCVAP00000020337	LSM	PF01423	1.7e-18	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
lsm6-201	ENSCVAT00000014708	601	80aa	ENSCVAP00000020337

Gene Model

Click here to download ENSCVAG00000001592's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCVAG00000001592's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000013124	39.6825	27.7778	cyprinodon_variegatus	ENSCVAP00000020337	62.5	43.75

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	poecilia_reticulata	ENSPREP00000034316	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	xiphophorus_maculatus	ENSXMAP00000009626	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	fundulus_heteroclitus	ENSFHEP00000006869	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	98.75	oryzias_latipes	ENSORLP00000038911	100	98.75
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	98.75	98.75	cyclopterus_lumpus	ENSCLMP00005009113	98.75	98.75
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	70	60	cyclopterus_lumpus	ENSCLMP00005043350	84.8485	72.7273
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	91.25	oreochromis_niloticus	ENSONIP00000012582	92.5926	90.1235
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	90	sparus_aurata	ENSSAUP00010017532	67.5676	64.8649
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	haplochromis_burtoni	ENSHBUP00000026143	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	astatotilapia_calliptera	ENSACLP00000037901	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	90	86.25	lates_calcarifer	ENSLCAP00010041684	83.7209	80.2326
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	poecilia_latipinna	ENSPLAP00000020350	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	poecilia_formosa	ENSPFOP00000008834	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	seriola_dumerili	ENSSDUP00000028324	49.6894	49.6894
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	acanthochromis_polyacanthus	ENSAPOP00000016709	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	anabas_testudineus	ENSATEP00000018154	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	dicentrarchus_labrax	ENSDLAP00005066209	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	96.25	88.75	scophthalmus_maximus	ENSSMAP00000007337	58.7786	54.1985
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	amphilophus_citrinellus	ENSACIP00000021527	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	oryzias_melastigma	ENSOMEP00000002607	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	87.5	neolamprologus_brichardi	ENSNBRP00000006207	75	70
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	tetraodon_nigroviridis	ENSTNIP00000020875	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	stegastes_partitus	ENSSPAP00000004195	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	98.75	hippocampus_comes	ENSHCOP00000019938	100	98.75
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	takifugu_rubripes	ENSTRUP00000055779	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	cynoglossus_semilaevis	ENSCSEP00000000593	81.6327	81.6327
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	amphiprion_percula	ENSAPEP00000033764	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	labrus_bergylta	ENSLBEP00000024069	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	maylandia_zebra	ENSMZEP00005012174	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	betta_splendens	ENSBSLP00000000479	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	90	87.5	pundamilia_nyererei	ENSPNYP00000016647	88.8889	86.4198
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	amphiprion_ocellaris	ENSAOCP00000000258	51.6129	51.6129
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	oryzias_javanicus	ENSOJAP00000046138	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	90	oryzias_sinensis	ENSOSIP00000042372	87.2093	83.7209
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	98.75	98.75	gasterosteus_aculeatus	ENSGACP00000022745	98.75	98.75
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	92.5	90	mastacembelus_armatus	ENSMAMP00000020864	78.7234	76.5957
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	98.75	98.75	nothobranchius_furzeri	ENSNFUP00015005781	71.8182	71.8182
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	kryptolebias_marmoratus	ENSKMAP00000005410	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	95	88.75	sander_lucioperca	ENSSLUP00000017570	80	74.7368
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	cottoperca_gobio	ENSCGOP00000014998	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	90	seriola_lalandi_dorsalis	ENSSLDP00000005199	64.6552	62.069
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	seriola_lalandi_dorsalis	ENSSLDP00000026408	83.3333	83.3333
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	88.75	73.75	caenorhabditis_elegans	Y71G12B.14.1	92.2078	76.6234
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	65	61.25	drosophila_melanogaster	FBpp0071449	65.8228	62.0253
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	90	ciona_intestinalis	ENSCINP00000032539	91.4634	87.8049
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	petromyzon_marinus	ENSPMAP00000007662	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	96.25	eptatretus_burgeri	ENSEBUP00000027938	100	96.25
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	callorhinchus_milii	ENSCMIP00000019239	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	latimeria_chalumnae	ENSLACP00000007832	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	98.75	96.25	lepisosteus_oculatus	ENSLOCP00000021788	98.75	96.25
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	lepisosteus_oculatus	ENSLOCP00000010767	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	clupea_harengus	ENSCHAP00000017168	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	danio_rerio	ENSDARP00000053772	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	carassius_auratus	ENSCARP00000055992	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	carassius_auratus	ENSCARP00000086059	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	astyanax_mexicanus	ENSAMXP00000039395	62.5	60.9375
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	96.25	ictalurus_punctatus	ENSIPUP00000006504	100	96.25
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	electrophorus_electricus	ENSEEEP00000035969	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	esox_lucius	ENSELUP00000014192	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	87.5	oncorhynchus_kisutch	ENSOKIP00005007830	78.9474	73.6842
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	oncorhynchus_kisutch	ENSOKIP00005063030	62.9921	61.4173
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	91.25	85	oncorhynchus_mykiss	ENSOMYP00000141224	82.0225	76.4045
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	oncorhynchus_mykiss	ENSOMYP00000006188	49.6894	48.4472
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	92.5	86.25	salmo_salar	ENSSSAP00000175303	77.8947	72.6316
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	salmo_salar	ENSSSAP00000103691	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	salmo_trutta	ENSSTUP00000025142	63.4921	61.9048
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	salmo_trutta	ENSSTUP00000002595	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	gadus_morhua	ENSGMOP00000016658	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	xenopus_tropicalis	ENSXETP00000051104	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	chrysemys_picta_bellii	ENSCPBP00000039922	84.2105	80
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	crocodylus_porosus	ENSCPRP00005012078	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	sphenodon_punctatus	ENSSPUP00000011280	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	laticauda_laticaudata	ENSLLTP00000000588	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	notechis_scutatus	ENSNSUP00000025306	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	notechis_scutatus	ENSNSUP00000006230	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	pseudonaja_textilis	ENSPTXP00000014727	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	88.75	83.75	anas_platyrhynchos_platyrhynchos	ENSAPLP00000012384	92.2078	87.013
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	gallus_gallus	ENSGALP00010009047	39.4089	37.4384
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	87.5	83.75	meleagris_gallopavo	ENSMGAP00000031348	73.6842	70.5263
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	serinus_canaria	ENSSCAP00000020913	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	ornithorhynchus_anatinus	ENSOANP00000050304	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	sarcophilus_harrisii	ENSSHAP00000029357	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	77.5	73.75	choloepus_hoffmanni	ENSCHOP00000003025	98.4127	93.6508
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	parus_major	ENSPMJP00000011353	68.9655	65.5172
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	63.75	58.75	erinaceus_europaeus	ENSEEUP00000001907	65.3846	60.2564
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	88.75	dasypus_novemcinctus	ENSDNOP00000019235	80.6452	76.3441
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	93.75	dasypus_novemcinctus	ENSDNOP00000023203	100	93.75
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	callithrix_jacchus	ENSCJAP00000085485	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	callithrix_jacchus	ENSCJAP00000004517	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	cercocebus_atys	ENSCATP00000000572	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	77.5	71.25	cercocebus_atys	ENSCATP00000031352	87.3239	80.2817
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	macaca_fascicularis	ENSMFAP00000020177	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	60	55	echinops_telfairi	ENSETEP00000010629	100	91.6667
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	macaca_nemestrina	ENSMNEP00000022289	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	78.75	72.5	macaca_nemestrina	ENSMNEP00000034426	88.7324	81.6901
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	mandrillus_leucophaeus	ENSMLEP00000021904	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	macaca_mulatta	ENSMMUP00000064440	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	gorilla_gorilla	ENSGGOP00000030209	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	pan_paniscus	ENSPPAP00000029823	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	pongo_abelii	ENSPPYP00000038093	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	95	85	papio_anubis	ENSPANP00000015812	72.381	64.7619
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	vulpes_vulpes	ENSVVUP00000012623	68.3761	64.9573
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	pan_troglodytes	ENSPTRP00000028301	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	homo_sapiens	ENSP00000296581	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	canis_lupus_familiaris	ENSCAFP00845017704	48.4848	46.0606
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	felis_catus	ENSFCAP00000002804	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	92.5	87.5	ursus_americanus	ENSUAMP00000017905	60.6557	57.377
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	92.5	87.5	panthera_leo	ENSPLOP00000015542	61.6667	58.3333
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	91.25	86.25	ailuropoda_melanoleuca	ENSAMEP00000037603	62.931	59.4828
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	panthera_pardus	ENSPPRP00000022241	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	98.75	95	mustela_putorius_furo	ENSMPUP00000006881	91.8605	88.3721
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	physeter_catodon	ENSPCTP00005002619	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	91.25	87.5	delphinapterus_leucas	ENSDLEP00000021904	98.6487	94.5946
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	98.75	93.75	balaenoptera_musculus	ENSBMSP00010004146	100	94.9367
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	loxodonta_africana	ENSLAFP00000001635	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	equus_asinus	ENSEASP00005037789	69.5652	66.087
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	tursiops_truncatus	ENSTTRP00000004315	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	91.25	86.25	sus_scrofa	ENSSSCP00000032187	58.871	55.6452
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	85	camelus_dromedarius	ENSCDRP00005029321	78.125	70.8333
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	bos_taurus	ENSBTAP00000063045	79.2079	75.2475
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	95	88.75	bos_taurus	ENSBTAP00000071619	95	88.75
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	86.25	83.75	capra_hircus	ENSCHIP00000010295	97.1831	94.3662
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	capra_hircus	ENSCHIP00000006503	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	86.25	80	capra_hircus	ENSCHIP00000028830	90.7895	84.2105
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	98.75	92.5	ochotona_princeps	ENSOPRP00000010214	100	93.6709
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	98.75	88.75	ovis_aries_rambouillet	ENSOARP00020006000	94.0476	84.5238
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	oryctolagus_cuniculus	ENSOCUP00000015026	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	marmota_marmota_marmota	ENSMMMP00000001782	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	cricetulus_griseus_chok1gshd	ENSCGRP00001016964	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	urocitellus_parryii	ENSUPAP00010000394	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	dipodomys_ordii	ENSDORP00000000874	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	mus_caroli	MGP_CAROLIEiJ_P0085078	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	mesocricetus_auratus	ENSMAUP00000015486	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	mus_musculus	ENSMUSP00000119841	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	mus_spretus	MGP_SPRETEiJ_P0088586	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	83.75	mus_spicilegus	ENSMSIP00000026665	93.75	83.75
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	mus_spicilegus	ENSMSIP00000035178	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	rattus_norvegicus	ENSRNOP00000050933	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	93.75	octodon_degus	ENSODEP00000003006	100	93.75
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	98.75	92.5	octodon_degus	ENSODEP00000026924	98.75	92.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	87.5	80	octodon_degus	ENSODEP00000025437	90.9091	83.1169
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	97.5	93.75	octodon_degus	ENSODEP00000026055	97.5	93.75
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	mus_pahari	MGP_PahariEiJ_P0053382	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	cavia_porcellus	ENSCPOP00000028260	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	86.25	heterocephalus_glaber_female	ENSHGLP00000000198	80.6452	74.1936
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	66.25	56.25	monodelphis_domestica	ENSMODP00000044699	32.1212	27.2727
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	pelodiscus_sinensis	ENSPSIP00000019072	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	erpetoichthys_calabaricus	ENSECRP00000001438	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	92.5	87.5	anolis_carolinensis	ENSACAP00000003889	71.1538	67.3077
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	97.5	91.25	bos_grunniens	ENSBGRP00000014067	97.5	91.25
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	92.5	87.5	bos_grunniens	ENSBGRP00000013218	62.7119	59.322
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	60	55	sorex_araneus	ENSSARP00000000633	100	91.6667
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	91.25	85	ficedula_albicollis	ENSFALP00000026554	83.908	78.1609
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	panthera_tigris_altaica	ENSPTIP00000023229	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	97.5	91.25	bison_bison_bison	ENSBBBP00000011559	97.5	91.25
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	bison_bison_bison	ENSBBBP00000012782	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	microtus_ochrogaster	ENSMOCP00000023278	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	chelonoidis_abingdonii	ENSCABP00000027554	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	96.25	90	bos_indicus_hybrid	ENSBIXP00005024022	96.25	90
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	bos_indicus_hybrid	ENSBIXP00005028750	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	rhinopithecus_roxellana	ENSRROP00000006232	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	rhinolophus_ferrumequinum	ENSRFEP00010022865	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	phascolarctos_cinereus	ENSPCIP00000031578	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	91.25	ciona_savignyi	ENSCSAVP00000003476	91.4634	89.0244
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	92.5	86.25	strigops_habroptila	ENSSHBP00005020100	83.1461	77.5281
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	92.5	87.5	ursus_maritimus	ENSUMAP00000021515	60.6557	57.377
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	microcebus_murinus	ENSMICP00000045921	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	86.25	microcebus_murinus	ENSMICP00000046703	88.2353	81.1765
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	struthio_camelus_australis	ENSSCUP00000022310	77.6699	73.7864
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	saimiri_boliviensis_boliviensis	ENSSBOP00000008648	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	77.5	67.5	saimiri_boliviensis_boliviensis	ENSSBOP00000023178	89.8551	78.2609
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	83.75	76.25	cervus_hanglu_yarkandensis	ENSCHYP00000020196	51.5385	46.9231
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	cervus_hanglu_yarkandensis	ENSCHYP00000002737	48.7805	46.3415
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	otolemur_garnettii	ENSOGAP00000022313	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	otolemur_garnettii	ENSOGAP00000015997	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	92.5	86.25	aquila_chrysaetos_chrysaetos	ENSACCP00020006011	65.4867	61.0619
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	carlito_syrichta	ENSTSYP00000031164	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	82.5	73.75	carlito_syrichta	ENSTSYP00000011700	86.8421	77.6316
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	87.5	oncorhynchus_tshawytscha	ENSOTSP00005067059	72.1154	67.3077
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	oncorhynchus_tshawytscha	ENSOTSP00005067056	63.4921	61.9048
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	78.75	71.25	jaculus_jaculus	ENSJJAP00000014479	86.3014	78.0822
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	88.75	82.5	jaculus_jaculus	ENSJJAP00000006584	88.75	82.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	jaculus_jaculus	ENSJJAP00000010195	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	cebus_imitator	ENSCCAP00000037104	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	97.5	93.75	cebus_imitator	ENSCCAP00000005811	97.5	93.75
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	salvator_merianae	ENSSMRP00000000447	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	paramormyrops_kingsleyae	ENSPKIP00000038373	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	myotis_lucifugus	ENSMLUP00000019356	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	92.5	88.75	catagonus_wagneri	ENSCWAP00000013569	76.2887	73.1959
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	pygocentrus_nattereri	ENSPNAP00000031435	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	propithecus_coquereli	ENSPCOP00000005788	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	nomascus_leucogenys	ENSNLEP00000006757	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	87.5	82.5	aotus_nancymaae	ENSANAP00000007530	93.3333	88
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	aotus_nancymaae	ENSANAP00000025694	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	93.75	86.25	podarcis_muralis	ENSPMRP00000020414	85.2273	78.4091
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	chlorocebus_sabaeus	ENSCSAP00000014630	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	sciurus_vulgaris	ENSSVLP00005012571	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	vicugna_pacos	ENSVPAP00000006435	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	95	88.75	phocoena_sinus	ENSPSNP00000018937	78.3505	73.1959
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	ictidomys_tridecemlineatus	ENSSTOP00000002389	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	peromyscus_maniculatus_bairdii	ENSPEMP00000011917	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	naja_naja	ENSNNAP00000015634	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	leptobrachium_leishanense	ENSLLEP00000003354	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	91.25	86.25	coturnix_japonica	ENSCJPP00005001775	60.3306	57.0248
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	scleropages_formosus	ENSSFOP00015025644	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	91.25	86.25	moschus_moschiferus	ENSMMSP00000013580	76.0417	71.875
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	100	myripristis_murdjan	ENSMMDP00005016471	100	100
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	88.75	86.25	terrapene_carolina_triunguis	ENSTMTP00000021683	91.0256	88.4615
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	71.25	61.25	vombatus_ursinus	ENSVURP00010009339	73.0769	62.8205
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	vombatus_ursinus	ENSVURP00010013769	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	gopherus_evgoodei	ENSGEVP00005023660	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	prolemur_simus	ENSPSMP00000036684	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	86.25	78.75	prolemur_simus	ENSPSMP00000030897	86.25	78.75
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	nannospalax_galili	ENSNGAP00000019218	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	61.25	45	saccharomyces_cerevisiae	YDR378C	56.9767	41.8605
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	rhinopithecus_bieti	ENSRBIP00000007924	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	chinchilla_lanigera	ENSCLAP00000007838	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	72.5	63.75	chinchilla_lanigera	ENSCLAP00000008110	82.8571	72.8571
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	sinocyclocheilus_grahami	ENSSGRP00000013958	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	sinocyclocheilus_grahami	ENSSGRP00000062628	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	92.5	86.25	hucho_hucho	ENSHHUP00000030803	51.7483	48.2517
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	97.5	denticeps_clupeoides	ENSDCDP00000039241	100	97.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	canis_lupus_dingo	ENSCAFP00020033374	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	96.25	cyprinus_carpio_carpio	ENSCCRP00000098198	90.9091	87.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	90	87.5	cyprinus_carpio_carpio	ENSCCRP00000172129	81.8182	79.5455
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	91.25	85	taeniopygia_guttata	ENSTGUP00000030461	30.9322	28.8136
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	neovison_vison	ENSNVIP00000011129	48.1928	45.7831
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	anser_brachyrhynchus	ENSABRP00000016664	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	100	95	geospiza_fortis	ENSGFOP00000012948	100	95
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	98.75	92.5	bos_mutus	ENSBMUP00000003107	98.75	92.5
ENSCVAG00000001592	cyprinodon_variegatus	ENSCVAP00000020337	98.75	92.5	bos_mutus	ENSBMUP00000022468	98.75	92.5

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression