Description

Ensembl ID ENSCUSG00005010120 Gene ID Accession -
Symbol Alias - Full Name FMRP translational regulator 1
Status Confidence Length 20604 bases Strand Minus strand
Position 14 : 2466393 - 2486996 RNA binding domain Agenet , KH_1 , KH_9 , FXMRP1_C_core
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCUSP00005021415 Agenet PF05641 1.6e-06 1
ENSCUSP00005021415 KH_1 PF00013 4.2e-17 2
ENSCUSP00005021415 KH_1 PF00013 4.2e-17 3
ENSCUSP00005021415 KH_9 PF17904 8.5e-39 4
ENSCUSP00005021415 FXMRP1_C_core PF12235 6e-45 5
ENSCUSP00005021419 Agenet PF05641 1.6e-06 1
ENSCUSP00005021419 KH_1 PF00013 4.3e-17 2
ENSCUSP00005021419 KH_1 PF00013 4.3e-17 3
ENSCUSP00005021419 KH_9 PF17904 8.7e-39 4
ENSCUSP00005021419 FXMRP1_C_core PF12235 6.3e-45 5
ENSCUSP00005021517 Agenet PF05641 1.7e-06 1
ENSCUSP00005021517 KH_1 PF00013 4.5e-17 2
ENSCUSP00005021517 KH_1 PF00013 4.5e-17 3
ENSCUSP00005021517 KH_9 PF17904 8.1e-39 4
ENSCUSP00005021517 FXMRP1_C_core PF12235 2.7e-30 5
ENSCUSP00005021517 FXMRP1_C_core PF12235 2.7e-30 6
ENSCUSP00005021383 Agenet PF05641 1.7e-06 1
ENSCUSP00005021383 KH_1 PF00013 4.3e-17 2
ENSCUSP00005021383 KH_1 PF00013 4.3e-17 3
ENSCUSP00005021383 KH_9 PF17904 8.6e-39 4
ENSCUSP00005021383 FXMRP1_C_core PF12235 1.6e-43 5
ENSCUSP00005021462 Agenet PF05641 1.9e-06 1
ENSCUSP00005021462 KH_1 PF00013 5.2e-17 2
ENSCUSP00005021462 KH_1 PF00013 5.2e-17 3
ENSCUSP00005021462 KH_9 PF17904 9.4e-39 4
ENSCUSP00005021462 FXMRP1_C_core PF12235 1.2e-43 5
ENSCUSP00005021228 Agenet PF05641 2e-06 1
ENSCUSP00005021228 KH_1 PF00013 1.2e-15 2
ENSCUSP00005021228 KH_1 PF00013 1.2e-15 3
ENSCUSP00005021228 KH_9 PF17904 1.2e-38 4
ENSCUSP00005021228 FXMRP1_C_core PF12235 1.4e-43 5
ENSCUSP00005021233 Agenet PF05641 2.1e-06 1
ENSCUSP00005021233 KH_1 PF00013 1.1e-15 2
ENSCUSP00005021233 KH_1 PF00013 1.1e-15 3
ENSCUSP00005021233 KH_9 PF17904 1.1e-38 4
ENSCUSP00005021233 FXMRP1_C_core PF12235 6.4e-44 5
ENSCUSP00005021224 Agenet PF05641 2.1e-06 1
ENSCUSP00005021224 KH_1 PF00013 1.2e-15 2
ENSCUSP00005021224 KH_1 PF00013 1.2e-15 3
ENSCUSP00005021224 KH_9 PF17904 1.2e-38 4
ENSCUSP00005021224 FXMRP1_C_core PF12235 1.4e-43 5
ENSCUSP00005021181 Agenet PF05641 2.1e-06 1
ENSCUSP00005021181 KH_1 PF00013 1e-15 2
ENSCUSP00005021181 KH_1 PF00013 1e-15 3
ENSCUSP00005021181 KH_9 PF17904 1.1e-38 4
ENSCUSP00005021181 FXMRP1_C_core PF12235 1.4e-43 5
ENSCUSP00005020917 Agenet PF05641 2.1e-06 1
ENSCUSP00005020917 KH_1 PF00013 1.2e-15 2
ENSCUSP00005020917 KH_1 PF00013 1.2e-15 3
ENSCUSP00005020917 KH_9 PF17904 1.3e-38 4
ENSCUSP00005020917 FXMRP1_C_core PF12235 1.6e-43 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCUST00005021683 1731 576aa ENSCUSP00005020917
- ENSCUST00005021956 1722 573aa ENSCUSP00005021181
- ENSCUST00005021999 1719 572aa ENSCUSP00005021224
- ENSCUST00005022003 1701 566aa ENSCUSP00005021228
- ENSCUST00005022008 1689 562aa ENSCUSP00005021233
- ENSCUST00005022159 1539 512aa ENSCUSP00005021383
- ENSCUST00005022191 1488 495aa ENSCUSP00005021415
- ENSCUST00005022195 1506 501aa ENSCUSP00005021419
- ENSCUST00005022240 1581 526aa ENSCUSP00005021462
- ENSCUST00005022297 1509 502aa ENSCUSP00005021517

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCUSG00005010120

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCUSG00005010120

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression