Description

Ensembl ID ENSCSAG00000006083 Gene ID Accession -
Symbol PRPF40B Alias - Full Name pre-mRNA processing factor 40 homolog B
Status Confidence Length 13674 bases Strand Plus strand
Position 11 : 45875889 - 45889562 RNA binding domain FF
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCSAP00000002366 FF PF01846 1.2e-41 1
ENSCSAP00000002366 FF PF01846 1.2e-41 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
PRPF40B-201 ENSCSAT00000004104 2679 892aa ENSCSAP00000002366

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000001207165.49351.3078chlorocebus_sabaeusENSCSAP0000000236672.982157.1749

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236663.228756.7265ornithorhynchus_anatinusENSOANP0000003586070.324263.0923
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236691.816187.7803sarcophilus_harrisiiENSSHAP0000002417787.969984.1031
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236683.744479.8206notamacropus_eugeniiENSMEUP0000000083788.507184.3602
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236640.022436.9955choloepus_hoffmanniENSCHOP0000000427241.852338.687
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.094296.9731dasypus_novemcinctusENSDNOP0000003345593.383192.3159
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236677.242176.1211erinaceus_europaeusENSEEUP0000000667689.248787.9534
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236662.780361.5471echinops_telfairiENSETEP0000001580065.497164.2105
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.085296.5247callithrix_jacchusENSCJAP0000003908699.198298.6254
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.533697.4215cercocebus_atysENSCATP0000001710099.885299.7704
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236699.775899.6637macaca_mulattaENSMMUP0000005737599.775899.6637
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.533697.4215macaca_fascicularisENSMFAP0000002160299.885299.7704
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236699.887999.7758macaca_nemestrinaENSMNEP0000001894499.887999.7758
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.533697.4215papio_anubisENSPANP0000000231499.885299.7704
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.421597.1973mandrillus_leucophaeusENSMLEP0000003972999.770499.5408
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236699.551698.8789gorilla_gorillaENSGGOP0000000155699.551698.8789
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.982197.4215pan_paniscusENSPPAP0000001034098.09297.5309
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236691.479890.583pongo_abeliiENSPPYP0000000512788.025987.1629
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236699.551699.2152homo_sapiensENSP0000044807399.551699.2152
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.878997.6457canis_lupus_familiarisENSCAFP0084502684988.465487.3621
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236690.134588.3408vulpes_vulpesENSVVUP0000002977391.053289.2412
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.197396.861pan_troglodytesENSPTRP0000005023699.540899.1963
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.542697.1973ailuropoda_melanoleucaENSAMEP0000000101898.653297.3064
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236696.188394.843mustela_putorius_furoENSMPUP0000001446798.394597.0183
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236620.067318.2735ursus_americanusENSUAMP0000002080364.388558.6331
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236686.547184.6413felis_catusENSFCAP0000004922685.398283.5177
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.094296.9731panthera_leoENSPLOP0000001792498.758597.6298
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236696.076294.2825tursiops_truncatusENSTTRP0000001119298.279896.445
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.094296.861panthera_pardusENSPPRP0000001682198.758597.5169
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.430596.5247physeter_catodonENSPCTP0000501142298.320396.4166
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.515793.722delphinapterus_leucasENSDLEP0000002251598.383496.5358
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236694.730993.0493loxodonta_africanaENSLAFP0000001230697.014995.2928
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.206396.3004balaenoptera_musculusENSBMSP0001002535598.096396.1926
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236693.497893.0493equus_asinusENSEASP0000500153998.465297.9929
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.878998.3184equus_caballusENSECAP0000001867196.816796.2678
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236680.044878.8117procavia_capensisENSPCAP0000001248881.786980.5269
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.291594.1704sus_scrofaENSSSCP0000000021598.039296.8858
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236696.86195.852camelus_dromedariusENSCDRP0000500806281.740880.8893
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.179493.8341capra_hircusENSCHIP0000002852398.150396.763
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236696.076294.5067bos_taurusENSBTAP0000005756789.363987.9041
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.85294.3946ovis_aries_rambouilletENSOARP0002000069798.050596.5596
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236692.488889.9103ochotona_princepsENSOPRP0000000422194.501791.8671
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.85294.7309marmota_marmota_marmotaENSMMMP0000002638897.714396.5714
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236692.71389.9103oryctolagus_cuniculusENSOCUP0000004406878.68776.3083
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236694.730993.6099dipodomys_ordiiENSDORP0000000025097.126495.977
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236693.497892.0404urocitellus_parryiiENSUPAP0001001201295.75294.2595
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.85294.3946mesocricetus_auratusENSMAUP0000001206897.491496.0091
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.982196.6368cricetulus_griseus_chok1gshdENSCGRP0000100499697.653696.3129
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.179493.4978mus_caroliMGP_CAROLIEiJ_P003974797.250995.5326
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.179493.2735mus_pahariMGP_PahariEiJ_P004309897.250995.3036
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.291593.4978mus_musculusENSMUSP0000011586997.365495.5326
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.179493.3857mus_spretusMGP_SPRETEiJ_P004158197.250995.4181
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.197395.4036rattus_norvegicusENSRNOP0000008066697.415795.618
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.8796.4126cavia_porcellusENSCPOP0000002221898.089996.6292
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236615.246615.2466octodon_degusENSODEP00000014776100100
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.291593.4978mus_spicilegusENSMSIP0000000339197.813695.9724
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.085295.5157heterocephalus_glaber_femaleENSHGLP0000000563996.54494.9833
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236693.609991.8161ursus_maritimusENSUMAP0000000897392.469590.6977
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236689.237785.426vombatus_ursinusENSVURP0001000870189.137785.3303
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.206396.9731bos_grunniensENSBGRP0000000327798.096396.8645
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236696.076295.1794otolemur_garnettiiENSOGAP0000000458898.167297.2509
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.878998.2063microcebus_murinusENSMICP0000003190398.547597.8771
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236699.663799.1031aotus_nancymaaeENSANAP0000002429499.440798.8814
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236694.955293.3857chinchilla_lanigeraENSCLAP0000000229797.919196.3006
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236696.412694.9552bos_indicus_hybridENSBIXP0000503735492.872691.4687
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236689.013584.8655phascolarctos_cinereusENSPCIP0000003636790.227386.0227
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236696.300494.0583monodon_monocerosENSMMNP0001501876579.684677.8293
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236692.376791.4798tupaia_belangeriENSTBEP0000000627094.387293.4708
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.430597.4215ictidomys_tridecemlineatusENSSTOP0000002906296.166595.1807
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236696.973196.6368saimiri_boliviensis_boliviensisENSSBOP0000001808699.083698.74
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.206396.9731bison_bison_bisonENSBBBP0000001539498.096396.8645
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236693.72292.3767jaculus_jaculusENSJJAP0000001152697.096495.7027
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.094296.6368catagonus_wagneriENSCWAP0000002414597.874796.4206
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236658.520257.1749sorex_araneusENSSARP0000001083167.354865.8064
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236649.663749.2152sorex_araneusENSSARP0000001177097.362696.4835
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.309496.0762rhinolophus_ferrumequinumENSRFEP0001001907597.528196.2921
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236696.748995.5157myotis_lucifugusENSMLUP0000000582497.294396.0541
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.85294.0583phocoena_sinusENSPSNP0000001368498.050596.2156
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236694.170492.8251bos_mutusENSBMUP0000003140898.245696.8421
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.318497.3094sciurus_vulgarisENSSVLP0000501978898.208397.2004
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236694.730993.0493nannospalax_galiliENSNGAP0000002058196.571494.8571
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236692.71390.6951canis_lupus_dingoENSCAFP0002001706095.386493.3103
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236675.784873.991nomascus_leucogenysENSNLEP0000002365892.729890.535
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.291593.8341moschus_moschiferusENSMMSP0000002026897.477195.9862
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.403693.6099peromyscus_maniculatus_bairdiiENSPEMP0000001703197.035395.2109
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.542697.7579prolemur_simusENSPSMP0000002565798.322297.5391
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236699.663799.4395rhinopithecus_roxellanaENSRROP0000002877399.663799.4395
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.179493.8341microtus_ochrogasterENSMOCP0000000114097.139695.7666
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236695.515794.1704neovison_visonENSNVIP0000000797390.158788.8889
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236691.479890.4709pteropus_vampyrusENSPVAP0000001497394.226393.1871
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.533696.9731carlito_syrichtaENSTSYP0000001250597.315496.7561
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236696.86196.3004rhinopithecus_bietiENSRBIP0000001186097.078796.5169
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236687.556185.9865panthera_tigris_altaicaENSPTIP0000001516496.778295.0434
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236697.085296.6368cebus_imitatorENSCCAP0000002472399.198298.74
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236698.878998.3184propithecus_coquereliENSPCOP0000002999198.657798.0984
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236645.627829.0359caenorhabditis_elegansZK1098.1a.156.215535.7735
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236654.484338.2287drosophila_melanogasterFBpp007733360.297842.3077
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236654.260140.1345ciona_intestinalisENSCINP0000001682659.386543.9264
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236672.197357.6233petromyzon_marinusENSPMAP0000000335772.522557.8829
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236644.730936.2108eptatretus_burgeriENSEBUP0000000554973.21159.2661
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236674.215262.3318latimeria_chalumnaeENSLACP0000002175974.049262.1924
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236677.690665.8072xenopus_tropicalisENSXETP0000007048974.117662.7808
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236664.686156.7265chrysemys_picta_belliiENSCPBP0000002778871.499462.7014
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236668.72260.426crocodylus_porosusENSCPRP0000500266973.766564.8616
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236629.484325.8969sphenodon_punctatusENSSPUP0000002127080.182970.4268
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236654.596447.7578notechis_scutatusENSNSUP0000002528484.110573.5751
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236653.363247.0852pseudonaja_textilisENSPTXP0000000861681.646772.0412
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236654.484344.2825erpetoichthys_calabaricusENSECRP0000001619368.741255.8699
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236654.14847.9821anolis_carolinensisENSACAP0000002678777.156568.3706
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236653.13947.3094naja_najaENSNNAP0000001370683.597974.4268
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236614.349810.2018ciona_savignyiENSCSAVP0000001383667.015747.644
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236630.156915.8072saccharomyces_cerevisiaeYKL012W46.140724.1852
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236675.560566.9283gopherus_evgoodeiENSGEVP0000501347377.829168.9376
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236675.560564.6861salvator_merianaeENSSMRP0000001182376.590965.5682
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236654.708548.5426podarcis_muralisENSPMRP0000003436982.711973.3898
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236663.004555.6054terrapene_carolina_triunguisENSTMTP0000003048771.410463.0241
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236663.004554.9327chelonoidis_abingdoniiENSCABP0000001202666.195557.715
ENSCSAG00000006083chlorocebus_sabaeusENSCSAP0000000236667.600956.0538leptobrachium_leishanenseENSLLEP0000000686865.048553.9374

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression