Description

Ensembl ID ENSCPVG00000001266 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 33081 bases Strand Minus strand
Position 9 : 14210187 - 14243267 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCPVP00000024314 RRM_1 PF00076 2.3e-14 1
ENSCPVP00000024314 Surp PF01805 1.1e-18 2
ENSCPVP00000024314 cwf21 PF08312 4.1e-10 3
ENSCPVP00000024314 CID PF04818 3.5e-08 4
ENSCPVP00000024318 RRM_1 PF00076 2.3e-14 1
ENSCPVP00000024318 Surp PF01805 1e-18 2
ENSCPVP00000024318 cwf21 PF08312 3.8e-10 3
ENSCPVP00000024318 CID PF04818 3.4e-08 4
ENSCPVP00000001848 RRM_1 PF00076 2.5e-14 1
ENSCPVP00000001848 Surp PF01805 1.1e-18 2
ENSCPVP00000001848 cwf21 PF08312 4e-10 3
ENSCPVP00000001848 CID PF04818 3.8e-08 4
ENSCPVP00000001885 RRM_1 PF00076 2.6e-14 1
ENSCPVP00000001885 Surp PF01805 9.7e-19 2
ENSCPVP00000001885 cwf21 PF08312 4.2e-10 3
ENSCPVP00000001885 CID PF04818 4e-08 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCPVT00000001921 3181 930aa ENSCPVP00000001848
- ENSCPVT00000001959 2913 970aa ENSCPVP00000001885
- ENSCPVT00000025920 2841 946aa ENSCPVP00000024314
- ENSCPVT00000027089 2694 897aa ENSCPVP00000024318

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCPVG00000001266

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCPVG00000001266

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression