Description

Ensembl ID ENSCPUG00000013408 Gene ID 106892137 Accession -
Symbol Alias - Full Name UPF2 regulator of nonsense mediated mRNA decay
Status Confidence Length 54090 bases Strand Plus strand
Position KQ482224.1 : 1422183 - 1476272 RNA binding domain Upf2 , MIF4G
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCPUP00000019704 Upf2 PF04050 8.5e-32 1
ENSCPUP00000019704 MIF4G PF02854 5.2e-80 2
ENSCPUP00000019704 MIF4G PF02854 5.2e-80 3
ENSCPUP00000019704 MIF4G PF02854 5.2e-80 4
ENSCPUP00000019708 Upf2 PF04050 8.6e-32 1
ENSCPUP00000019708 MIF4G PF02854 4.7e-80 2
ENSCPUP00000019708 MIF4G PF02854 4.7e-80 3
ENSCPUP00000019708 MIF4G PF02854 4.7e-80 4
ENSCPUP00000019712 MIF4G PF02854 7e-70 1
ENSCPUP00000019712 MIF4G PF02854 7e-70 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCPUT00000023379 3810 1269aa ENSCPUP00000019704
- ENSCPUT00000023383 3756 1251aa ENSCPUP00000019708
- ENSCPUT00000023387 1620 539aa ENSCPUP00000019712

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCPUG00000013408

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCPUG00000013408

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression