RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCPRG00005012023	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4082 bases	Strand	Plus strand
Position	MDVP01000028.1 : 84639294 - 84643375	RNA binding domain	Ribosomal_L30
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCPRP00005017264	Ribosomal_L30	PF00327	2.2e-13	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCPRT00005020212	387	128aa	ENSCPRP00005017264

Gene Model

Click here to download ENSCPRG00005012023's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCPRG00005012023's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCPRG00005012023

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	31.25	19.5312	caenorhabditis_elegans	W04B5.4.1	20.3046	12.6904
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	36.7188	23.4375	ciona_intestinalis	ENSCINP00000021853	19.3416	12.3457
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	48.4375	34.375	petromyzon_marinus	ENSPMAP00000005155	38.9937	27.673
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	50.7812	39.0625	eptatretus_burgeri	ENSEBUP00000022040	38.9222	29.9401
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	58.5938	46.0938	callorhinchus_milii	ENSCMIP00000000695	18.8917	14.8615
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	51.5625	44.5312	latimeria_chalumnae	ENSLACP00000014519	41.25	35.625
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	46.0938	lepisosteus_oculatus	ENSLOCP00000001656	42.6035	34.9112
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	59.375	42.9688	clupea_harengus	ENSCHAP00000002735	47.5	34.375
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.0312	41.4062	danio_rerio	ENSDARP00000092761	47.4026	34.4156
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	58.5938	40.625	carassius_auratus	ENSCARP00000030526	48.7013	33.7662
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	58.5938	39.8438	carassius_auratus	ENSCARP00000064517	46.5839	31.677
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	39.8438	astyanax_mexicanus	ENSAMXP00000005475	43.8272	31.4815
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	41.4062	ictalurus_punctatus	ENSIPUP00000006214	45.283	33.3333
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	39.8438	electrophorus_electricus	ENSEEEP00000007109	36.5482	25.8883
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	54.6875	39.0625	esox_lucius	ENSELUP00000069824	44.3038	31.6456
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	53.125	37.5	oncorhynchus_mykiss	ENSOMYP00000097303	43.038	30.3797
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	52.3438	37.5	oncorhynchus_kisutch	ENSOKIP00005048472	42.4051	30.3797
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	54.6875	39.0625	salmo_salar	ENSSSAP00000177806	44.0252	31.4465
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	52.3438	37.5	salmo_trutta	ENSSTUP00000019588	42.4051	30.3797
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.8125	44.5312	fundulus_heteroclitus	ENSFHEP00000011259	39.3617	30.3191
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.8125	40.625	poecilia_reticulata	ENSPREP00000012607	43.2749	30.4094
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	60.1562	44.5312	xiphophorus_maculatus	ENSXMAP00000023705	48.125	35.625
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.0312	41.4062	oryzias_latipes	ENSORLP00000043574	40.5556	29.4444
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.8125	45.3125	cyclopterus_lumpus	ENSCLMP00005042624	46.25	36.25
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	39.8438	oreochromis_niloticus	ENSONIP00000030177	45	31.875
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	54.6875	39.0625	haplochromis_burtoni	ENSHBUP00000004098	43.75	31.25
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	39.8438	astatotilapia_calliptera	ENSACLP00000002157	44.375	31.875
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.0312	41.4062	sparus_aurata	ENSSAUP00010051557	45.625	33.125
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	54.6875	40.625	lates_calcarifer	ENSLCAP00010014911	44.0252	32.7044
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	44.5312	xenopus_tropicalis	ENSXETP00000108961	36.5979	29.3814
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	42.9688	35.1562	chrysemys_picta_bellii	ENSCPBP00000006579	50	40.9091
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	45.3125	38.2812	chrysemys_picta_bellii	ENSCPBP00000019059	53.211	44.9541
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	63.2812	50.7812	gallus_gallus	ENSGALP00010021972	24.2515	19.4611
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	45.3125	notamacropus_eugenii	ENSMEUP00000009242	43.8272	35.8025
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	58.5938	46.0938	notechis_scutatus	ENSNSUP00000003129	47.7707	37.5796
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	65.625	52.3438	meleagris_gallopavo	ENSMGAP00000032071	52.5	41.875
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	44.5312	32.0312	papio_anubis	ENSPANP00000052801	42.8571	30.8271
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	53.9062	43.75	vulpes_vulpes	ENSVVUP00000014708	47.5862	38.6207
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	39.0625	30.4688	vulpes_vulpes	ENSVVUP00000040220	46.2963	36.1111
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	53.125	44.5312	heterocephalus_glaber_female	ENSHGLP00000027702	47.2222	39.5833
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	71.875	55.4688	serinus_canaria	ENSSCAP00000023414	62.1622	47.973
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	59.375	53.125	pelodiscus_sinensis	ENSPSIP00000012856	53.9007	48.227
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	50.7812	42.1875	vicugna_pacos	ENSVPAP00000010962	48.8722	40.6015
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	35.9375	28.9062	pongo_abelii	ENSPPYP00000044076	45.5446	36.6337
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.8125	48.4375	erpetoichthys_calabaricus	ENSECRP00000001170	46.5409	38.9937
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	68.75	53.125	geospiza_fortis	ENSGFOP00000013028	24.7887	19.1549
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	42.9688	cyprinodon_variegatus	ENSCVAP00000030078	44.375	34.375
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	58.5938	46.0938	laticauda_laticaudata	ENSLLTP00000021556	47.7707	37.5796
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	58.5938	45.3125	pseudonaja_textilis	ENSPTXP00000002759	47.7707	36.9427
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	59.375	42.9688	poecilia_formosa	ENSPFOP00000015820	47.5	34.375
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	47.6562	39.8438	sphenodon_punctatus	ENSSPUP00000019573	38.8535	32.4841
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	60.1562	50.7812	sphenodon_punctatus	ENSSPUP00000012179	47.5309	40.1235
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	53.9062	39.0625	takifugu_rubripes	ENSTRUP00000036525	46.3087	33.557
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	53.9062	42.9688	procavia_capensis	ENSPCAP00000002016	54.7619	43.6508
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	42.9688	seriola_dumerili	ENSSDUP00000009117	45.283	34.5912
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	37.5	30.4688	physeter_catodon	ENSPCTP00005014592	47.5248	38.6139
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	39.8438	32.0312	physeter_catodon	ENSPCTP00005016614	46.789	37.6147
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.0312	39.8438	dicentrarchus_labrax	ENSDLAP00005069213	45.625	31.875
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	59.375	41.4062	cottoperca_gobio	ENSCGOP00000053755	47.5	33.125
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	58.5938	46.875	naja_naja	ENSNNAP00000026497	47.7707	38.2166
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	53.9062	45.3125	ictidomys_tridecemlineatus	ENSSTOP00000029284	51.8797	43.609
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.8125	42.1875	anabas_testudineus	ENSATEP00000012868	46.25	33.75
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	51.5625	37.5	labrus_bergylta	ENSLBEP00000036749	47.482	34.5324
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.8125	42.1875	labrus_bergylta	ENSLBEP00000023976	46.25	33.75
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.8125	42.1875	stegastes_partitus	ENSSPAP00000026716	46.25	33.75
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	43.75	anolis_carolinensis	ENSACAP00000000824	41.3793	32.1839
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	59.375	42.9688	poecilia_latipinna	ENSPLAP00000017061	47.5	34.375
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	60.9375	51.5625	chelonoidis_abingdonii	ENSCABP00000002182	47.8528	40.4908
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	53.9062	44.5312	octodon_degus	ENSODEP00000014261	52.2727	43.1818
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	39.0625	amphilophus_citrinellus	ENSACIP00000028904	41.7647	29.4118
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	63.2812	50	taeniopygia_guttata	ENSTGUP00000030244	51.2658	40.5063
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	52.3438	37.5	oncorhynchus_tshawytscha	ENSOTSP00005018530	42.4051	30.3797
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	50.7812	41.4062	phocoena_sinus	ENSPSNP00000016423	42.4837	34.6405
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	39.8438	neolamprologus_brichardi	ENSNBRP00000004921	44.375	31.875
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	42.9688	seriola_lalandi_dorsalis	ENSSLDP00000006903	45.283	34.5912
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	66.4062	53.9062	strigops_habroptila	ENSSHBP00005016475	52.795	42.8571
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	52.3438	43.75	carlito_syrichta	ENSTSYP00000031561	49.2647	41.1765
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	53.9062	40.625	tetraodon_nigroviridis	ENSTNIP00000016877	43.949	33.121
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.0312	41.4062	mastacembelus_armatus	ENSMAMP00000052836	45.625	33.125
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	59.375	42.1875	oryzias_javanicus	ENSOJAP00000019876	42.2222	30
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	58.5938	44.5312	betta_splendens	ENSBSLP00000020778	46.875	35.625
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	39.8438	maylandia_zebra	ENSMZEP00005029545	44.375	31.875
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	44.5312	scleropages_formosus	ENSSFOP00015016984	37.5661	30.1587
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	60.1562	53.125	terrapene_carolina_triunguis	ENSTMTP00000000043	47.2393	41.7178
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	54.6875	38.2812	larimichthys_crocea	ENSLCRP00005023070	45.4545	31.8182
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	35.1562	21.875	ciona_savignyi	ENSCSAVP00000003635	21.1268	13.1455
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	44.5312	paramormyrops_kingsleyae	ENSPKIP00000032183	45.283	35.8491
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	44.5312	kryptolebias_marmoratus	ENSKMAP00000001909	45	35.625
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	43.75	acanthochromis_polyacanthus	ENSAPOP00000023823	44.375	35
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	53.9062	43.75	amphiprion_percula	ENSAPEP00000009291	43.125	35
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.0312	40.625	nothobranchius_furzeri	ENSNFUP00015042693	45.9119	32.7044
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	39.8438	oryzias_melastigma	ENSOMEP00000028488	39.4444	28.3333
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	65.625	51.5625	anser_brachyrhynchus	ENSABRP00000011625	57.931	45.5172
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	53.9062	45.3125	leptobrachium_leishanense	ENSLLEP00000001185	43.3962	36.478
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	55.4688	39.8438	pundamilia_nyererei	ENSPNYP00000018938	44.375	31.875
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	48.4375	salvator_merianae	ENSSMRP00000028101	43.1138	37.1257
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.0312	42.1875	sander_lucioperca	ENSSLUP00000019724	45.625	33.75
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.0312	46.0938	podarcis_muralis	ENSPMRP00000008348	37.6289	30.4124
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	41.4062	scophthalmus_maximus	ENSSMAP00000032510	45.283	33.3333
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	40.625	pygocentrus_nattereri	ENSPNAP00000003465	45	32.5
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	53.125	43.75	amphiprion_ocellaris	ENSAOCP00000000140	42.5	35
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.8125	40.625	denticeps_clupeoides	ENSDCDP00000022307	45.9627	32.2981
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	54.6875	40.625	myripristis_murdjan	ENSMMDP00005037310	44.586	33.121
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	54.6875	42.1875	cynoglossus_semilaevis	ENSCSEP00000006538	44.0252	33.9623
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	66.4062	53.9062	aquila_chrysaetos_chrysaetos	ENSACCP00020021960	52.795	42.8571
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	54.6875	38.2812	cyprinus_carpio_carpio	ENSCCRP00000163938	47.619	33.3333
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.8125	39.8438	cyprinus_carpio_carpio	ENSCCRP00000072084	48.0519	33.1169
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	50.7812	38.2812	monodon_monoceros	ENSMMNP00015006814	44.2177	33.3333
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.8125	39.0625	sinocyclocheilus_grahami	ENSSGRP00000098760	46.8354	31.6456
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.8125	39.0625	sinocyclocheilus_grahami	ENSSGRP00000098761	48.0519	32.4675
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	57.0312	44.5312	ornithorhynchus_anatinus	ENSOANP00000045802	18.3417	14.3216
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	32.8125	28.125	moschus_moschiferus	ENSMMSP00000016589	42.8571	36.7347
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	35.1562	28.9062	prolemur_simus	ENSPSMP00000002770	42.8571	35.2381
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	58.5938	41.4062	oryzias_sinensis	ENSOSIP00000034419	41.6667	29.4444
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	56.25	40.625	hippocampus_comes	ENSHCOP00000002527	45.8599	33.121
ENSCPRG00005012023	crocodylus_porosus	ENSCPRP00005017264	69.5312	53.9062	ficedula_albicollis	ENSFALP00000004101	60.1351	46.6216

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression