Description

Ensembl ID ENSCPOG00000033068 Gene ID 100734070 Accession -
Symbol APOBEC1 Alias - Full Name apolipoprotein B mRNA editing enzyme catalytic subunit 1
Status Confidence Length 8637 bases Strand Minus strand
Position DS562883.1 : 2008466 - 2017102 RNA binding domain APOBEC_N , APOBEC_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCPOP00000027134 APOBEC_N PF08210 2.3e-31 1
ENSCPOP00000027134 APOBEC_C PF05240 2.1e-23 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
APOBEC1-201 ENSCPOT00000043129 1044 236aa ENSCPOP00000027134

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCPOG00000033068cavia_porcellusENSCPOP0000002951345.595928.4974cavia_porcellusENSCPOP0000002713437.288123.3051
ENSCPOG00000033068cavia_porcellusENSCPOP0000001771645.595928.4974cavia_porcellusENSCPOP0000002713437.288123.3051
ENSCPOG00000033068cavia_porcellusENSCPOP0000002275145.856429.2818cavia_porcellusENSCPOP0000002713435.169522.4576
ENSCPOG00000033068cavia_porcellusENSCPOP0000000831123.170714.6341cavia_porcellusENSCPOP0000002713440.254225.4237
ENSCPOG00000033068cavia_porcellusENSCPOP0000002767335.526321.4912cavia_porcellusENSCPOP0000002713434.32220.7627

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713466.525452.1186ornithorhynchus_anatinusENSOANP0000005460060.852747.6744
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713478.389859.7458sarcophilus_harrisiiENSSHAP0000001033680.434861.3043
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713476.694956.7797notamacropus_eugeniiENSMEUP0000001222676.694956.7797
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713438.983132.6271choloepus_hoffmanniENSCHOP0000000208475.409863.1148
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713479.66165.2542dasypus_novemcinctusENSDNOP0000003491779.66165.2542
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713467.372954.2373erinaceus_europaeusENSEEUP0000000828870.666756.8889
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713452.118641.5254erinaceus_europaeusENSEEUP0000000683758.571446.6667
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713479.237366.5254echinops_telfairiENSETEP0000000397379.237366.5254
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713478.813666.9492callithrix_jacchusENSCJAP000000098687563.7097
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.932268.2203cercocebus_atysENSCATP0000000716377.016164.9194
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.508568.2203macaca_fascicularisENSMFAP0000004508176.612964.9194
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.508568.2203macaca_mulattaENSMMUP0000007709980.508568.2203
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.084767.7966macaca_nemestrinaENSMNEP0000001052580.084767.7966
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.932268.2203papio_anubisENSPANP0000000417080.932268.2203
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.932268.2203mandrillus_leucophaeusENSMLEP0000002428480.932268.2203
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713475.423762.7119pan_paniscusENSPPAP0000000882381.651467.8899
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713481.355968.6441pan_troglodytesENSPTRP0000000788281.355968.6441
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.084766.5254pongo_abeliiENSPPYP0000000482080.084766.5254
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713481.779768.2203homo_sapiensENSP0000022930481.779768.2203
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.084766.5254canis_lupus_familiarisENSCAFP0084504121776.518263.5628
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.932267.3729vulpes_vulpesENSVVUP0000001437480.932267.3729
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713478.389865.678ursus_americanusENSUAMP0000001450275.819763.5246
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713479.66166.9492ailuropoda_melanoleucaENSAMEP000000074808067.234
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.966164.4068mustela_putorius_furoENSMPUP0000001742077.966164.4068
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713479.66167.3729felis_catusENSFCAP0000000867279.66167.3729
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.084767.3729panthera_leoENSPLOP0000000612180.084767.3729
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713479.66166.9492panthera_pardusENSPPRP0000002134979.66166.9492
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713460.593251.2712tursiops_truncatusENSTTRP0000001329176.470664.7059
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713476.271264.4068physeter_catodonENSPCTP0000502590476.271264.4068
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713473.728861.8644delphinapterus_leucasENSDLEP0000002247974.042662.1277
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.118665.678balaenoptera_musculusENSBMSP0001002596777.118665.678
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713476.271261.4407loxodonta_africanaENSLAFP0000002142280.717565.0224
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713479.237367.7966equus_asinusENSEASP0000502343679.237367.7966
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713464.830554.2373procavia_capensisENSPCAP0000000812881.818268.4492
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713479.237367.7966equus_caballusENSECAP0000003751079.237367.7966
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.542465.678sus_scrofaENSSSCP0000000070977.542465.678
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713476.271262.2881bos_taurusENSBTAP0000001954476.271262.2881
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.932268.2203camelus_dromedariusENSCDRP0000503128180.932268.2203
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713471.610258.0508ovis_aries_rambouilletENSOARP0002001095173.799159.8253
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713454.237344.4915ochotona_princepsENSOPRP0000000868871.910158.9888
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713478.389865.2542oryctolagus_cuniculusENSOCUP0000002111569.288457.6779
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713474.152560.5932capra_hircusENSCHIP0000000884972.614159.3361
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.966163.9831marmota_marmota_marmotaENSMMMP000000158068065.6522
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713472.457658.4746cricetulus_griseus_chok1gshdENSCGRP0000100895674.672560.262
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.542463.5593urocitellus_parryiiENSUPAP0001002797379.565265.2174
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713469.915352.9661dipodomys_ordiiENSDORP0000002189577.464858.6854
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713468.220355.9322mesocricetus_auratusENSMAUP0000002573172.522559.4595
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713411.44075.9322mus_caroliMGP_CAROLIEiJ_P007590415.16857.86517
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713438.559331.3559mus_pahariMGP_PahariEiJ_P005219075.206661.157
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713474.576360.1695mus_musculusENSMUSP0000010820576.855962.0087
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713474.576360.1695mus_spretusMGP_SPRETEiJ_P007907476.855962.0087
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713472.033957.2034mus_spicilegusENSMSIP0000003471768.825954.6559
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713472.033957.6271rattus_norvegicusENSRNOP0000009468156.856245.485
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713488.559384.322chinchilla_lanigeraENSCLAP0000002138490.869686.5217
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.932270.7627heterocephalus_glaber_femaleENSHGLP0000000196878.600868.7243
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.508566.5254otolemur_garnettiiENSOGAP0000002011080.508566.5254
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.084761.0169phascolarctos_cinereusENSPCIP0000003228980.084761.0169
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.118659.322monodelphis_domesticaENSMODP0000002245377.446859.5745
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713436.864431.3559microtus_ochrogasterENSMOCP0000001762876.991165.4867
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.542465.2542aotus_nancymaaeENSANAP0000001993173.790362.0968
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713472.457662.2881jaculus_jaculusENSJJAP0000002188574.672564.1921
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713474.576361.0169tupaia_belangeriENSTBEP0000000868275.213761.5385
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.542464.4068propithecus_coquereliENSPCOP0000000585080.973467.2566
ENSCPOG00000033068cavia_porcellusENSCPOP000000271347561.0169cervus_hanglu_yarkandensisENSCHYP0000002733873.140559.5041
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713479.66166.9492panthera_tigris_altaicaENSPTIP0000002404979.66166.9492
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.932268.6441microcebus_murinusENSMICP0000005027080.932268.6441
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713473.728862.2881monodon_monocerosENSMMNP0001502425474.042662.5532
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713461.440751.2712saimiri_boliviensis_boliviensisENSSBOP0000002839381.920968.3616
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713479.66167.3729vicugna_pacosENSVPAP0000000123979.66167.3729
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.118663.5593canis_lupus_dingoENSCAFP0002000424976.150662.7615
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.932266.9492rhinopithecus_roxellanaENSRROP0000001910180.932266.9492
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713433.050830.0847octodon_degusENSODEP0000000147479.591872.449
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713476.271262.7119moschus_moschiferusENSMMSP0000003077976.271262.7119
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713479.237366.9492cebus_imitatorENSCCAP0000000901379.237366.9492
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.542459.322vombatus_ursinusENSVURP0001002311379.565260.8696
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713463.559355.0847chlorocebus_sabaeusENSCSAP0000000606378.53468.0628
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713476.271262.2881bos_grunniensENSBGRP0000001554676.271262.2881
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713445.33936.4407sorex_araneusENSSARP0000001080581.679465.6489
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713456.355944.4915sorex_araneusENSSARP0000000003077.777861.4035
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713481.355966.1017sciurus_vulgarisENSSVLP0000500221081.355966.1017
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713475.847561.8644bison_bison_bisonENSBBBP0000000778575.847561.8644
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.932267.7966nomascus_leucogenysENSNLEP0000000647180.932267.7966
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713480.932266.9492rhinopithecus_bietiENSRBIP0000001413180.932266.9492
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713462.711950.8475pteropus_vampyrusENSPVAP0000001009063.519351.5021
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.966163.5593neovison_visonENSNVIP0000001063777.966163.5593
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713481.779768.2203prolemur_simusENSPSMP0000000705479.752166.5289
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713448.728840.678carlito_syrichtaENSTSYP0000002632781.560368.0851
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713477.542464.8305catagonus_wagneriENSCWAP0000000922777.542464.8305
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713478.389865.678ursus_maritimusENSUMAP0000002263975.819763.5246
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713478.813666.1017rhinolophus_ferrumequinumENSRFEP0001000658678.813666.1017
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713476.271262.2881bos_mutusENSBMUP0000000764976.271262.2881
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713474.152562.7119phocoena_sinusENSPSNP0000001419474.468162.9787
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713459.745847.0339ictidomys_tridecemlineatusENSSTOP0000001605380.571463.4286
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713472.457660.1695peromyscus_maniculatus_bairdiiENSPEMP0000002826374.672562.0087
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713476.271262.2881bos_indicus_hybridENSBIXP0000503301976.271262.2881
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713472.881458.4746nannospalax_galiliENSNGAP0000002430175.109260.262
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713452.118638.5593chrysemys_picta_belliiENSCPBP0000001990853.947439.9123
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713450.423736.4407chrysemys_picta_belliiENSCPBP0000001992248.178134.8178
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713453.389838.1356chrysemys_picta_belliiENSCPBP0000001990934.710724.7934
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713447.457634.322chrysemys_picta_belliiENSCPBP0000002438049.339235.6828
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713451.694935.5932chrysemys_picta_belliiENSCPBP0000001992150.413234.7107
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713452.542437.7119chrysemys_picta_belliiENSCPBP0000001990346.616533.4586
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713435.593225crocodylus_porosusENSCPRP0000501789755.629139.0728
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713450.847538.1356crocodylus_porosusENSCPRP0000500089755.045941.2844
ENSCPOG00000033068cavia_porcellusENSCPOP000000271345038.9831sphenodon_punctatusENSSPUP0000001178045.384635.3846
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713444.491528.8136anas_platyrhynchos_platyrhynchosENSAPLP0000002399553.571434.6939
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713447.881433.4746serinus_canariaENSSCAP0000002124758.247440.7216
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713438.135625.8475parus_majorENSPMJP0000000410144.117629.902
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713446.186433.4746parus_majorENSPMJP0000000409850.934636.9159
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713437.711926.2712taeniopygia_guttataENSTGUP0000003543836.625525.5144
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713447.033932.6271taeniopygia_guttataENSTGUP0000001350949.553634.375
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713437.288123.7288podarcis_muralisENSPMRP0000003437547.311830.1075
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713442.372929.2373podarcis_muralisENSPMRP0000003438645.871631.6514
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713436.864425strigops_habroptilaENSSHBP0000502250146.524131.5508
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713440.254227.1186strigops_habroptilaENSSHBP0000502249960.126640.5063
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713443.220328.3898salvator_merianaeENSSMRP0000000565053.403135.0785
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713435.593227.1186salvator_merianaeENSSMRP0000000567049.411837.6471
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713441.101727.9661pelodiscus_sinensisENSPSIP0000001432230.503120.7547
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713448.728835.5932pelodiscus_sinensisENSPSIP0000001405949.783636.3636
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713445.762732.2034aquila_chrysaetos_chrysaetosENSACCP0002002468047.577133.4802
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713439.406825.4237aquila_chrysaetos_chrysaetosENSACCP0002002467847.208130.4569
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713445.762731.7797anolis_carolinensisENSACAP0000003641649.315134.2466
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713445.33932.6271geospiza_fortisENSGFOP0000001614044.769932.2176
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713430.932220.339anser_brachyrhynchusENSABRP0000001544252.898634.7826
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713439.830527.1186chelonoidis_abingdoniiENSCABP0000001705045.192330.7692
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713436.440726.6949chelonoidis_abingdoniiENSCABP0000001699539.090928.6364
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713447.881434.322chelonoidis_abingdoniiENSCABP0000001702340.501829.0323
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713446.610233.4746chelonoidis_abingdoniiENSCABP0000001702457.591641.3613
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713448.305132.2034chelonoidis_abingdoniiENSCABP0000001704556.435637.6238
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713446.610236.8644chelonoidis_abingdoniiENSCABP0000001705556.122444.3878
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713449.152536.0169chelonoidis_abingdoniiENSCABP0000001702757.425742.0792
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713443.644134.322terrapene_carolina_triunguisENSTMTP0000002225052.55141.3265
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713430.508520.7627terrapene_carolina_triunguisENSTMTP0000000482355.81437.9845
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713439.406827.9661terrapene_carolina_triunguisENSTMTP0000002616352.247237.0787
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713440.254228.3898terrapene_carolina_triunguisENSTMTP0000001747042.600930.0448
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713444.915331.3559terrapene_carolina_triunguisENSTMTP0000002190127.249419.0231
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713438.135624.5763struthio_camelus_australisENSSCUP0000002537239.473725.4386
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713441.949230.0847ficedula_albicollisENSFALP0000001768551.832537.1728
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713433.050825ficedula_albicollisENSFALP0000003123138.80629.3532
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713448.305135.5932gopherus_evgoodeiENSGEVP0000500176149.565236.5217
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713449.152536.0169gopherus_evgoodeiENSGEVP0000500156049.152536.0169
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713442.796632.2034gopherus_evgoodeiENSGEVP0000500152443.162432.4786
ENSCPOG00000033068cavia_porcellusENSCPOP0000002713449.152536.0169gopherus_evgoodeiENSGEVP0000500158957.425742.0792

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression