RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCPGG00000009995	Gene ID		Accession	-
Symbol		Alias	-	Full Name	SYF2 pre-mRNA splicing factor
Status	Confidence	Length	2507 bases	Strand	Plus strand
Position	QJSC01002227.1 : 1387799 - 1390305	RNA binding domain	SYF2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCPGP00000014122	SYF2	PF08231	6.1e-55	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCPGT00000015485	1170	285aa	ENSCPGP00000014122

Gene Model

Click here to download ENSCPGG00000009995's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCPGG00000009995's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCPGG00000009995

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCPGG00000009995

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression