Description

Ensembl ID ENSCPGG00000009864 Gene ID Accession -
Symbol Alias - Full Name RNA polymerase I subunit A
Status Confidence Length 33042 bases Strand Minus strand
Position QJSC01002380.1 : 9217984 - 9251025 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCPGP00000015691 RNA_pol_Rpb1_4 PF05000 3e-24 1
ENSCPGP00000015691 RNA_pol_Rpb1_1 PF04997 5e-24 2
ENSCPGP00000015691 RNA_pol_Rpb1_5 PF04998 2.6e-102 3
ENSCPGP00000015691 RNA_pol_Rpb1_2 PF00623 1.1e-69 4
ENSCPGP00000015691 RNA_pol_Rpb1_3 PF04983 1.3e-38 5
ENSCPGP00000015781 RNA_pol_Rpb1_4 PF05000 3e-24 1
ENSCPGP00000015781 RNA_pol_Rpb1_1 PF04997 7.9e-24 2
ENSCPGP00000015781 RNA_pol_Rpb1_5 PF04998 2.6e-102 3
ENSCPGP00000015781 RNA_pol_Rpb1_2 PF00623 1.2e-69 4
ENSCPGP00000015781 RNA_pol_Rpb1_3 PF04983 1.2e-38 5
ENSCPGP00000015797 RNA_pol_Rpb1_4 PF05000 3.2e-24 1
ENSCPGP00000015797 RNA_pol_Rpb1_1 PF04997 1.2e-20 2
ENSCPGP00000015797 RNA_pol_Rpb1_2 PF00623 5.9e-70 3
ENSCPGP00000015797 RNA_pol_Rpb1_3 PF04983 1.4e-38 4
ENSCPGP00000015739 RNA_pol_Rpb1_4 PF05000 3.7e-24 1
ENSCPGP00000015739 RNA_pol_Rpb1_1 PF04997 1.4e-23 2
ENSCPGP00000015739 RNA_pol_Rpb1_5 PF04998 2.2e-102 3
ENSCPGP00000015739 RNA_pol_Rpb1_2 PF00623 1.3e-69 4
ENSCPGP00000015739 RNA_pol_Rpb1_3 PF04983 1.4e-38 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCPGT00000017179 5109 1702aa ENSCPGP00000015691
- ENSCPGT00000017229 5058 1685aa ENSCPGP00000015739
- ENSCPGT00000017271 5049 1682aa ENSCPGP00000015781
- ENSCPGT00000017287 2901 966aa ENSCPGP00000015797

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCPGG00000009864

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCPGG00000009864

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression