Description

Ensembl ID ENSCPGG00000001742 Gene ID Accession -
Symbol Alias - Full Name SMG7 nonsense mediated mRNA decay factor
Status Confidence Length 52626 bases Strand Plus strand
Position QJSC01002381.1 : 16601338 - 16653963 RNA binding domain EST1 , EST1_DNA_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCPGP00000002378 EST1 PF10374 1e-19 1
ENSCPGP00000002378 EST1_DNA_bind PF10373 3.4e-55 2
ENSCPGP00000002461 EST1 PF10374 1e-19 1
ENSCPGP00000002461 EST1_DNA_bind PF10373 3.4e-55 2
ENSCPGP00000002343 EST1 PF10374 1.1e-19 1
ENSCPGP00000002343 EST1_DNA_bind PF10373 3.6e-55 2
ENSCPGP00000002402 EST1 PF10374 1.1e-19 1
ENSCPGP00000002402 EST1_DNA_bind PF10373 3.6e-55 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCPGT00000002577 6340 1192aa ENSCPGP00000002343
- ENSCPGT00000002619 6190 1142aa ENSCPGP00000002378
- ENSCPGT00000002642 6188 1192aa ENSCPGP00000002402
- ENSCPGT00000002704 6071 1153aa ENSCPGP00000002461

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCPGG00000001742

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCPGG00000001742

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression