RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCPBG00000023933	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	7689 bases	Strand	Plus strand
Position	KK088216.1 : 1157233 - 1164921	RNA binding domain	Iml2-TPR_39
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCPBP00000034304	Iml2-TPR_39	PF10300	1.3e-72	1
ENSCPBP00000034304	Iml2-TPR_39	PF10300	1.3e-72	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCPBT00000040250	1245	414aa	ENSCPBP00000034304

Gene Model

Click here to download ENSCPBG00000023933's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCPBG00000023933's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000013433	41.0035	32.699	chrysemys_picta_bellii	ENSCPBP00000034304	57.2464	45.6522
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000036450	37.3288	28.9384	chrysemys_picta_bellii	ENSCPBP00000034304	52.657	40.8213
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000039675	24.8276	13.7931	chrysemys_picta_bellii	ENSCPBP00000034304	34.7826	19.3237

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	40.3382	25.6039	caenorhabditis_elegans	C32D5.6.1	28.8927	18.3391
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	41.7874	28.5024	ciona_intestinalis	ENSCINP00000012827	31.6271	21.5722
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	22.4638	15.4589	eptatretus_burgeri	ENSEBUP00000008806	23.7852	16.3683
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	28.0193	19.8068	latimeria_chalumnae	ENSLACP00000017344	27.23	19.2488
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	63.285	52.1739	lepisosteus_oculatus	ENSLOCP00000009773	44.4822	36.6723
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	56.5217	45.6522	clupea_harengus	ENSCHAP00000011108	40.3448	32.5862
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.6957	47.343	danio_rerio	ENSDARP00000085503	43.0089	34.6903
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.9372	47.5845	carassius_auratus	ENSCARP00000123537	36.3636	29.3592
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.971	46.8599	carassius_auratus	ENSCARP00000048893	42.4779	34.3363
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	53.6232	43.2367	astyanax_mexicanus	ENSAMXP00000044967	41.651	33.5835
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.971	48.0676	ictalurus_punctatus	ENSIPUP00000009968	42.4779	35.2212
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.2126	47.1014	electrophorus_electricus	ENSEEEP00000038983	43.0357	34.8214
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.9372	47.343	esox_lucius	ENSELUP00000055951	42.9577	34.507
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	47.343	oncorhynchus_kisutch	ENSOKIP00005018074	43.3099	34.507
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.6618	47.5845	oncorhynchus_kisutch	ENSOKIP00005016718	43.4859	34.6831
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	47.343	oncorhynchus_mykiss	ENSOMYP00000060800	43.3099	34.507
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	47.343	oncorhynchus_mykiss	ENSOMYP00000039720	43.3099	34.507
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	53.1401	42.9952	salmo_salar	ENSSSAP00000065947	38.5965	31.2281
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.1787	47.5845	salmo_salar	ENSSSAP00000033580	42.9825	34.5614
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	47.5845	salmo_trutta	ENSSTUP00000011630	42.3408	33.9071
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	47.343	salmo_trutta	ENSSTUP00000090300	43.3099	34.507
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	54.3478	43.4783	gadus_morhua	ENSGMOP00000061402	38.2653	30.6122
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	52.1739	42.7536	fundulus_heteroclitus	ENSFHEP00000019275	44.4444	36.4198
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	46.1353	32.3671	poecilia_reticulata	ENSPREP00000019420	37.1595	26.07
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.1787	46.1353	oryzias_latipes	ENSORLP00000028138	43.5169	33.9254
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.9034	46.6184	xiphophorus_maculatus	ENSXMAP00000014141	44.0497	34.2806
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	52.1739	43.7198	cyclopterus_lumpus	ENSCLMP00005028509	37.2414	31.2069
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.2464	46.8599	oreochromis_niloticus	ENSONIP00000040640	39.4343	32.2795
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.6618	48.3092	haplochromis_burtoni	ENSHBUP00000031139	43.7168	35.3982
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	48.0676	astatotilapia_calliptera	ENSACLP00000012695	43.5398	35.2212
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	52.8986	42.029	sparus_aurata	ENSSAUP00010056039	36.5	29
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.4879	46.8599	lates_calcarifer	ENSLCAP00010034743	40.6838	33.1624
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.1787	49.0338	xenopus_tropicalis	ENSXETP00000078431	41.0385	34.0033
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	61.1111	51.9324	pseudonaja_textilis	ENSPTXP00000027444	44.6996	37.9859
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	18.599	10.8696	laticauda_laticaudata	ENSLLTP00000005573	21.5084	12.5698
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	52.4155	45.1691	notechis_scutatus	ENSNSUP00000021982	43.3134	37.3253
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	49.2754	41.3043	naja_naja	ENSNNAP00000018468	38.2022	32.0225
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	62.0773	49.0338	erpetoichthys_calabaricus	ENSECRP00000025177	44.7735	35.3659
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	56.7633	47.1014	pygocentrus_nattereri	ENSPNAP00000001716	43.5185	36.1111
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	60.3865	50.7246	anolis_carolinensis	ENSACAP00000016825	43.8596	36.8421
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.9372	46.6184	oryzias_melastigma	ENSOMEP00000009311	40.1316	31.7434
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	56.5217	45.1691	scophthalmus_maximus	ENSSMAP00000003046	39.9317	31.9113
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.1787	47.5845	amphiprion_percula	ENSAPEP00000025552	43.4397	34.9291
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.7295	44.4444	cyprinodon_variegatus	ENSCVAP00000030470	44.5065	34.2644
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.2464	44.686	poecilia_latipinna	ENSPLAP00000021511	41.3613	32.2862
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.7295	46.8599	gasterosteus_aculeatus	ENSGACP00000006671	42.0035	34.0949
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	42.2705	30.1932	ciona_savignyi	ENSCSAVP00000006543	31.362	22.4014
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	46.3768	kryptolebias_marmoratus	ENSKMAP00000012472	43.617	34.0426
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.6618	48.7923	labrus_bergylta	ENSLBEP00000008632	43.8721	35.8792
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	53.8647	42.9952	acanthochromis_polyacanthus	ENSAPOP00000027463	41.4498	33.0855
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.9372	46.3768	oryzias_sinensis	ENSOSIP00000033679	41.6382	32.7645
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.4541	46.6184	takifugu_rubripes	ENSTRUP00000035281	41.0866	32.7674
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	53.8647	43.4783	stegastes_partitus	ENSSPAP00000015062	41.7603	33.7079
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	64.0097	60.628	gopherus_evgoodei	ENSGEVP00005027280	48.8029	46.2247
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.2126	46.1353	hippocampus_comes	ENSHCOP00000016091	42.7305	33.8652
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.9034	46.6184	poecilia_formosa	ENSPFOP00000000794	44.0497	34.2806
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	47.5845	38.1642	neolamprologus_brichardi	ENSNBRP00000016143	39.165	31.4115
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	61.1111	57.2464	chelonoidis_abingdonii	ENSCABP00000003981	45.4219	42.5494
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.4541	47.8261	sinocyclocheilus_grahami	ENSSGRP00000096776	42.8319	35.0442
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	45.8937	35.7488	sinocyclocheilus_grahami	ENSSGRP00000076732	35.7815	27.8719
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.6957	46.8599	paramormyrops_kingsleyae	ENSPKIP00000026245	42.9329	34.2756
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.4541	45.8937	betta_splendens	ENSBSLP00000009419	42.8319	33.6283
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	56.2802	44.9275	anabas_testudineus	ENSATEP00000049628	40.5923	32.4042
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	48.7923	41.7874	salvator_merianae	ENSSMRP00000003359	40.3194	34.5309
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	47.343	oncorhynchus_tshawytscha	ENSOTSP00005003218	37.386	29.7872
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	55.314	44.2029	oncorhynchus_tshawytscha	ENSOTSP00005052899	42.4074	33.8889
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.7295	47.343	larimichthys_crocea	ENSLCRP00005031233	39.2447	32.1839
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.1787	47.5845	amphiprion_ocellaris	ENSAOCP00000007602	43.4397	34.9291
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	54.1063	42.9952	amphilophus_citrinellus	ENSACIP00000014877	41.3284	32.8413
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.4541	47.1014	cyprinus_carpio_carpio	ENSCCRP00000109781	42.5308	34.2706
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.971	47.1014	cyprinus_carpio_carpio	ENSCCRP00000064118	42.4779	34.5133
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.1787	47.8261	myripristis_murdjan	ENSMMDP00005050850	43.672	35.2941
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.0048	46.6184	denticeps_clupeoides	ENSDCDP00000015345	41.4763	33.9192
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.1787	47.5845	sander_lucioperca	ENSSLUP00000012454	43.4397	34.9291
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	47.1014	seriola_lalandi_dorsalis	ENSSLDP00000021152	43.7722	34.6975
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	65.942	63.285	terrapene_carolina_triunguis	ENSTMTP00000020660	68.9394	66.1616
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	53.8647	43.2367	dicentrarchus_labrax	ENSDLAP00005037718	38.918	31.2391
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	53.6232	44.2029	pundamilia_nyererei	ENSPNYP00000019943	40.3636	33.2727
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.971	46.1353	cynoglossus_semilaevis	ENSCSEP00000020002	45.8891	36.5201
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.4879	45.1691	tetraodon_nigroviridis	ENSTNIP00000003541	43.038	33.8156
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.6618	47.343	seriola_dumerili	ENSSDUP00000011188	43.9502	34.8754
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	62.5604	53.8647	podarcis_muralis	ENSPMRP00000036779	35.823	30.8437
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	32.8502	23.913	oryzias_javanicus	ENSOJAP00000047981	30.2895	22.049
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	56.5217	46.3768	maylandia_zebra	ENSMZEP00005030884	40.625	33.3333
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	60.1449	47.5845	leptobrachium_leishanense	ENSLLEP00000001746	39.1509	30.9748
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	57.4879	46.8599	scleropages_formosus	ENSSFOP00015072141	42.1239	34.3363
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	60.3865	50.4831	scleropages_formosus	ENSSFOP00015014488	43.7828	36.6025
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	47.8261	mastacembelus_armatus	ENSMAMP00000050170	43.617	35.1064
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	58.4541	46.6184	nothobranchius_furzeri	ENSNFUP00015005584	42.984	34.2806
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	47.8261	hucho_hucho	ENSHHUP00000015923	42.5606	34.2561
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	59.4203	47.5845	hucho_hucho	ENSHHUP00000066008	43.3099	34.6831
ENSCPBG00000023933	chrysemys_picta_bellii	ENSCPBP00000034304	54.1063	44.2029	cottoperca_gobio	ENSCGOP00000014005	38.488	31.4433

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression