RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCPBG00000001771	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	7756 bases	Strand	Minus strand
Position	KK082971.1 : 2526961 - 2534716	RNA binding domain	Mitoc_L55
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCPBP00000002195	Mitoc_L55	PF09776	4.6e-47	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCPBT00000002679	1547	124aa	ENSCPBP00000002195

Gene Model

Click here to download ENSCPBG00000001771's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCPBG00000001771's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCPBG00000001771

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	59.6774	44.3548	petromyzon_marinus	ENSPMAP00000000948	63.2479	47.0085
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.9355	51.6129	callorhinchus_milii	ENSCMIP00000047195	70.9402	54.7009
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	73.3871	55.6452	latimeria_chalumnae	ENSLACP00000018490	68.9394	52.2727
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	52.4194	clupea_harengus	ENSCHAP00000019020	46.988	39.1566
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.9355	48.3871	danio_rerio	ENSDARP00000063716	62.406	45.1128
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	65.3226	50.8064	carassius_auratus	ENSCARP00000097311	61.8321	48.0916
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.129	48.3871	astyanax_mexicanus	ENSAMXP00000042490	62.5954	45.8015
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	64.5161	50.8064	ictalurus_punctatus	ENSIPUP00000001783	60.6061	47.7273
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	63.7097	50.8064	electrophorus_electricus	ENSEEEP00000003202	59.8485	47.7273
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	67.7419	50.8064	esox_lucius	ENSELUP00000062815	64.1221	48.0916
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	68.5484	51.6129	oncorhynchus_mykiss	ENSOMYP00000060747	64.8855	48.855
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	58.0645	39.5161	salmo_salar	ENSSSAP00000070828	45	30.625
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	69.3548	51.6129	salmo_salar	ENSSSAP00000118002	68.254	50.7937
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	69.3548	53.2258	salmo_trutta	ENSSTUP00000045734	68.8	52.8
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.9355	50.8064	salmo_trutta	ENSSTUP00000092916	61.4815	46.6667
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	58.0645	48.3871	gadus_morhua	ENSGMOP00000020432	50.3497	41.958
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	61.2903	42.7419	fundulus_heteroclitus	ENSFHEP00000007068	54.6763	38.1295
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.129	45.9677	poecilia_reticulata	ENSPREP00000030014	58.5714	40.7143
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	61.2903	48.3871	oryzias_latipes	ENSORLP00000038678	31.2757	24.6914
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	45.1613	xiphophorus_maculatus	ENSXMAP00000007955	55.7143	40
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	65.3226	48.3871	cyclopterus_lumpus	ENSCLMP00005043246	54.7297	40.5405
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.0968	45.1613	oreochromis_niloticus	ENSONIP00000051454	58.3333	42.4242
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	47.5806	haplochromis_burtoni	ENSHBUP00000025734	56.5217	42.7536
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	47.5806	astatotilapia_calliptera	ENSACLP00000007621	56.5217	42.7536
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	64.5161	50	sparus_aurata	ENSSAUP00010056568	57.554	44.6043
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	63.7097	50	lates_calcarifer	ENSLCAP00010017513	54.8611	43.0556
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	70.9677	58.0645	xenopus_tropicalis	ENSXETP00000105135	65.6716	53.7313
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	76.6129	61.2903	crocodylus_porosus	ENSCPRP00005003439	76	60.8
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	59.6774	42.7419	parus_major	ENSPMJP00000004622	58.2677	41.7323
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.9355	51.6129	pseudonaja_textilis	ENSPTXP00000013853	65.873	50.7937
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	61.2903	44.3548	serinus_canaria	ENSSCAP00000007950	59.375	42.9688
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	71.7742	54.0323	laticauda_laticaudata	ENSLLTP00000015769	70.6349	53.1746
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	79.8387	65.3226	sphenodon_punctatus	ENSSPUP00000000902	79.2	64.8
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	67.7419	50.8064	notechis_scutatus	ENSNSUP00000020160	66.6667	50
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.129	50	gallus_gallus	ENSGALP00010039229	38.3178	28.972
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.9355	53.2258	ornithorhynchus_anatinus	ENSOANP00000036876	69.1667	55
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	50	naja_naja	ENSNNAP00000013455	47.561	37.8049
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	47.5806	34.6774	ficedula_albicollis	ENSFALP00000001120	37.1069	27.044
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	57.2581	43.5484	ficedula_albicollis	ENSFALP00000026801	59.1667	45
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	68.5484	51.6129	erpetoichthys_calabaricus	ENSECRP00000014262	64.3939	48.4848
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	58.0645	42.7419	erpetoichthys_calabaricus	ENSECRP00000031419	63.1579	46.4912
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	63.7097	50	pygocentrus_nattereri	ENSPNAP00000030534	59.8485	46.9697
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.129	45.9677	anas_platyrhynchos_platyrhynchos	ENSAPLP00000025398	18.3857	12.7803
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.129	50.8064	oryzias_melastigma	ENSOMEP00000026395	59.854	45.9854
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	64.5161	48.3871	scophthalmus_maximus	ENSSMAP00000008784	58.8235	44.1176
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	61.2903	48.3871	amphiprion_percula	ENSAPEP00000031438	52.7778	41.6667
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	56.4516	45.1613	gasterosteus_aculeatus	ENSGACP00000002772	76.087	60.8696
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.0968	45.9677	kryptolebias_marmoratus	ENSKMAP00000002615	60.6299	44.8819
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	92.7419	86.2903	pelodiscus_sinensis	ENSPSIP00000012059	92	85.6
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	60.4839	47.5806	labrus_bergylta	ENSLBEP00000020947	59.5238	46.8254
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	60.4839	47.5806	labrus_bergylta	ENSLBEP00000014049	59.5238	46.8254
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	60.4839	45.1613	strigops_habroptila	ENSSHBP00005003978	30.1205	22.49
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	60.4839	48.3871	acanthochromis_polyacanthus	ENSAPOP00000001578	52.0833	41.6667
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	73.3871	52.4194	anser_brachyrhynchus	ENSABRP00000002898	72.2222	51.5873
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.0968	48.3871	oryzias_sinensis	ENSOSIP00000038589	31.8182	24.7934
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	51.6129	36.2903	oryzias_sinensis	ENSOSIP00000008730	41.0256	28.8462
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	51.6129	36.2903	oryzias_sinensis	ENSOSIP00000022998	26.2295	18.4426
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	69.3548	48.3871	takifugu_rubripes	ENSTRUP00000063941	63.7037	44.4444
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	59.6774	48.3871	stegastes_partitus	ENSSPAP00000015381	52.4823	42.5532
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	95.1613	89.5161	gopherus_evgoodei	ENSGEVP00005017233	94.4	88.8
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	60.4839	43.5484	hippocampus_comes	ENSHCOP00000018735	41.2088	29.6703
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.129	45.9677	poecilia_formosa	ENSPFOP00000012701	58.5714	40.7143
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.0968	45.9677	neolamprologus_brichardi	ENSNBRP00000025436	55.7971	41.3043
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	88.7097	83.0645	chelonoidis_abingdonii	ENSCABP00000020107	88.7097	83.0645
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.0968	49.1936	sinocyclocheilus_grahami	ENSSGRP00000009619	63.1148	50
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	63.7097	49.1936	sinocyclocheilus_grahami	ENSSGRP00000006068	68.6957	53.0435
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	48.3871	paramormyrops_kingsleyae	ENSPKIP00000022947	60.4651	46.5116
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	45.1613	betta_splendens	ENSBSLP00000026358	52.349	37.5839
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	60.4839	45.1613	anabas_testudineus	ENSATEP00000065671	51.0204	38.0952
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	71.7742	58.871	salvator_merianae	ENSSMRP00000021759	70.0787	57.4803
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	67.7419	49.1936	meleagris_gallopavo	ENSMGAP00000023585	55.6291	40.3974
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.9355	51.6129	oncorhynchus_tshawytscha	ENSOTSP00005049253	63.3588	48.855
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	64.5161	47.5806	aquila_chrysaetos_chrysaetos	ENSACCP00020020258	67.2269	49.5798
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	47.5806	larimichthys_crocea	ENSLCRP00005005552	56.5217	42.7536
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	60.4839	48.3871	amphiprion_ocellaris	ENSAOCP00000011798	52.0833	41.6667
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	47.5806	amphilophus_citrinellus	ENSACIP00000002022	57.3529	43.3824
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.9355	52.4194	cyprinus_carpio_carpio	ENSCCRP00000147026	54.9669	43.0464
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.129	50.8064	cyprinus_carpio_carpio	ENSCCRP00000043684	61.6541	47.3684
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	61.2903	49.1936	myripristis_murdjan	ENSMMDP00005006023	52.7778	42.3611
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	53.2258	denticeps_clupeoides	ENSDCDP00000009095	56.1151	47.482
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	64.5161	51.6129	sander_lucioperca	ENSSLUP00000048446	54.7945	43.8356
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.0968	48.3871	seriola_lalandi_dorsalis	ENSSLDP00000025170	52.381	40.8163
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	67.7419	50.8064	coturnix_japonica	ENSCJPP00005012391	74.3363	55.7522
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	97.5806	94.3548	terrapene_carolina_triunguis	ENSTMTP00000010935	96.8	93.6
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	63.7097	49.1936	dicentrarchus_labrax	ENSDLAP00005075336	55.6338	42.9577
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.9355	48.3871	cynoglossus_semilaevis	ENSCSEP00000030500	59.7122	43.1655
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	48.3871	seriola_dumerili	ENSSDUP00000031367	53.0612	40.8163
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	72.5806	63.7097	podarcis_muralis	ENSPMRP00000026840	57.6923	50.641
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	76.6129	68.5484	podarcis_muralis	ENSPMRP00000026800	76	68
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	63.7097	49.1936	oryzias_javanicus	ENSOJAP00000022955	57.6642	44.5255
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.9032	47.5806	maylandia_zebra	ENSMZEP00005020768	56.5217	42.7536
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	69.3548	52.4194	leptobrachium_leishanense	ENSLLEP00000046213	64.6617	48.8722
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	71.7742	55.6452	phascolarctos_cinereus	ENSPCIP00000029360	70.6349	54.7619
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	62.0968	47.5806	mastacembelus_armatus	ENSMAMP00000033065	52.381	40.1361
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	57.2581	45.1613	nothobranchius_furzeri	ENSNFUP00015047503	56.3492	44.4444
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	66.9355	50.8064	hucho_hucho	ENSHHUP00000086054	63.3588	48.0916
ENSCPBG00000001771	chrysemys_picta_bellii	ENSCPBP00000002195	59.6774	45.9677	cottoperca_gobio	ENSCGOP00000033214	43.787	33.7278

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression