RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCMMG00000014008	Gene ID		Accession	-
Symbol		Alias	-	Full Name	pre-mRNA processing factor 3
Status	Confidence	Length	10371 bases	Strand	Minus strand
Position	26 : 418515 - 428885	RNA binding domain	PWI , PRP3
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCMMP00000022313	PWI	PF01480	9.7e-14	1
ENSCMMP00000022313	PRP3	PF08572	1.3e-76	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCMMT00000024452	2634	684aa	ENSCMMP00000022313

Gene Model

Click here to download ENSCMMG00000014008's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCMMG00000014008's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCMMG00000014008

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCMMG00000014008

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression