Description

Ensembl ID ENSCMMG00000003194 Gene ID Accession -
Symbol Alias - Full Name UPF2 regulator of nonsense mediated mRNA decay
Status Confidence Length 57355 bases Strand Minus strand
Position 1 : 6453153 - 6510507 RNA binding domain Upf2 , MIF4G
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCMMP00000005131 Upf2 PF04050 5.8e-33 1
ENSCMMP00000005131 MIF4G PF02854 7.3e-80 2
ENSCMMP00000005131 MIF4G PF02854 7.3e-80 3
ENSCMMP00000005131 MIF4G PF02854 7.3e-80 4
ENSCMMP00000005147 Upf2 PF04050 5.8e-33 1
ENSCMMP00000005147 MIF4G PF02854 6.7e-80 2
ENSCMMP00000005147 MIF4G PF02854 6.7e-80 3
ENSCMMP00000005147 MIF4G PF02854 6.7e-80 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCMMT00000005698 3900 1292aa ENSCMMP00000005131
- ENSCMMT00000005714 3837 1278aa ENSCMMP00000005147

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCMMG00000003194

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCMMG00000003194

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression