RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCMMG00000002088	Gene ID		Accession	-
Symbol		Alias	-	Full Name	splicing factor 3b subunit 5
Status	Confidence	Length	255 bases	Strand	Minus strand
Position	3 : 46175478 - 46175732	RNA binding domain	SF3b10
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCMMP00000003212	SF3b10	PF07189	4.5e-40	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCMMT00000003600	255	85aa	ENSCMMP00000003212

Gene Model

Click here to download ENSCMMG00000002088's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCMMG00000002088's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCMMG00000002088

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCMMG00000002088

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression