RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCMMG00000001511	Gene ID		Accession	-
Symbol		Alias	-	Full Name	LSM14A mRNA processing body assembly factor
Status	Confidence	Length	19130 bases	Strand	Plus strand
Position	12 : 10295496 - 10314625	RNA binding domain	LSM14 , SM-ATX , FDF
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCMMP00000002321	LSM14	PF12701	4.3e-32	1
ENSCMMP00000002321	SM-ATX	PF14438	2.9e-08	2
ENSCMMP00000002321	FDF	PF09532	2.9e-31	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCMMT00000002610	2125	461aa	ENSCMMP00000002321

Gene Model

Click here to download ENSCMMG00000001511's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCMMG00000001511's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCMMG00000001511

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCMMG00000001511

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression