Description

Ensembl ID ENSCMIG00000006754 Gene ID 103190874 Accession -
Symbol Alias - Full Name transportin-3-like
Status Confidence Length 15088 bases Strand Minus strand
Position KI636420.1 : 38088 - 53175 RNA binding domain IBN_N , Xpo1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCMIP00000013497 IBN_N PF03810 2.6e-05 1
ENSCMIP00000013497 Xpo1 PF08389 3.3e-23 2
ENSCMIP00000013525 IBN_N PF03810 2.8e-05 1
ENSCMIP00000013525 Xpo1 PF08389 4.2e-24 2
ENSCMIP00000013502 IBN_N PF03810 3.4e-05 1
ENSCMIP00000013502 Xpo1 PF08389 7.3e-22 2
ENSCMIP00000013531 IBN_N PF03810 4.6e-05 1
ENSCMIP00000013531 Xpo1 PF08389 1.2e-22 2
ENSCMIP00000013490 IBN_N PF03810 5e-05 1
ENSCMIP00000013490 Xpo1 PF08389 8.7e-23 2
ENSCMIP00000013513 IBN_N PF03810 5.5e-05 1
ENSCMIP00000013513 Xpo1 PF08389 6.2e-23 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCMIT00000013787 3856 922aa ENSCMIP00000013490
- ENSCMIT00000013794 2999 959aa ENSCMIP00000013497
- ENSCMIT00000013799 2966 948aa ENSCMIP00000013502
- ENSCMIT00000013810 2841 946aa ENSCMIP00000013513
- ENSCMIT00000013822 2652 883aa ENSCMIP00000013525
- ENSCMIT00000013828 2610 869aa ENSCMIP00000013531

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCMIG00000006754callorhinchus_miliiENSCMIP0000001018772.103555.3431callorhinchus_miliiENSCMIP0000001349766.840551.3034
ENSCMIG00000006754callorhinchus_miliiENSCMIP0000001940840.894920.9157callorhinchus_miliiENSCMIP0000001349740.980220.9593

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCMIG00000006754callorhinchus_miliiENSCMIP0000001349739.833223.7748caenorhabditis_elegansF53G2.6a.146.079627.503
ENSCMIG00000006754callorhinchus_miliiENSCMIP0000001349758.394239.5203drosophila_melanogasterFBpp030712560.085840.6652
ENSCMIG00000006754callorhinchus_miliiENSCMIP0000001349761.105342.3358ciona_intestinalisENSCINP0000001039363.557544.0347
ENSCMIG00000006754callorhinchus_miliiENSCMIP0000001349759.958340.7716ciona_savignyiENSCSAVP0000001474562.162242.2703
ENSCMIG00000006754callorhinchus_miliiENSCMIP0000001349734.306617.6225saccharomyces_cerevisiaeYOR160W33.847717.3868

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression