| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSCMIG00000006754 | Gene ID |
103190874 |
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
transportin-3-like |
| Status |
Confidence |
Length |
15088 bases |
Strand |
Minus strand |
| Position |
KI636420.1 : 38088 - 53175 |
RNA binding domain |
IBN_N , Xpo1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSCMIP00000013497 |
IBN_N |
PF03810 |
2.6e-05 |
1 |
| ENSCMIP00000013497 |
Xpo1 |
PF08389 |
3.3e-23 |
2 |
| ENSCMIP00000013525 |
IBN_N |
PF03810 |
2.8e-05 |
1 |
| ENSCMIP00000013525 |
Xpo1 |
PF08389 |
4.2e-24 |
2 |
| ENSCMIP00000013502 |
IBN_N |
PF03810 |
3.4e-05 |
1 |
| ENSCMIP00000013502 |
Xpo1 |
PF08389 |
7.3e-22 |
2 |
| ENSCMIP00000013531 |
IBN_N |
PF03810 |
4.6e-05 |
1 |
| ENSCMIP00000013531 |
Xpo1 |
PF08389 |
1.2e-22 |
2 |
| ENSCMIP00000013490 |
IBN_N |
PF03810 |
5e-05 |
1 |
| ENSCMIP00000013490 |
Xpo1 |
PF08389 |
8.7e-23 |
2 |
| ENSCMIP00000013513 |
IBN_N |
PF03810 |
5.5e-05 |
1 |
| ENSCMIP00000013513 |
Xpo1 |
PF08389 |
6.2e-23 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSCMIT00000013787 |
3856 |
922aa |
ENSCMIP00000013490 |
| - |
ENSCMIT00000013794 |
2999 |
959aa |
ENSCMIP00000013497 |
| - |
ENSCMIT00000013799 |
2966 |
948aa |
ENSCMIP00000013502 |
| - |
ENSCMIT00000013810 |
2841 |
946aa |
ENSCMIP00000013513 |
| - |
ENSCMIT00000013822 |
2652 |
883aa |
ENSCMIP00000013525 |
| - |
ENSCMIT00000013828 |
2610 |
869aa |
ENSCMIP00000013531 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCMIG00000006754 | callorhinchus_milii | ENSCMIP00000010187 | 72.1035 | 55.3431 | callorhinchus_milii | ENSCMIP00000013497 | 66.8405 | 51.3034 |
| ENSCMIG00000006754 | callorhinchus_milii | ENSCMIP00000019408 | 40.8949 | 20.9157 | callorhinchus_milii | ENSCMIP00000013497 | 40.9802 | 20.9593 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCMIG00000006754 | callorhinchus_milii | ENSCMIP00000013497 | 39.8332 | 23.7748 | caenorhabditis_elegans | F53G2.6a.1 | 46.0796 | 27.503 |
| ENSCMIG00000006754 | callorhinchus_milii | ENSCMIP00000013497 | 58.3942 | 39.5203 | drosophila_melanogaster | FBpp0307125 | 60.0858 | 40.6652 |
| ENSCMIG00000006754 | callorhinchus_milii | ENSCMIP00000013497 | 61.1053 | 42.3358 | ciona_intestinalis | ENSCINP00000010393 | 63.5575 | 44.0347 |
| ENSCMIG00000006754 | callorhinchus_milii | ENSCMIP00000013497 | 59.9583 | 40.7716 | ciona_savignyi | ENSCSAVP00000014745 | 62.1622 | 42.2703 |
| ENSCMIG00000006754 | callorhinchus_milii | ENSCMIP00000013497 | 34.3066 | 17.6225 | saccharomyces_cerevisiae | YOR160W | 33.8477 | 17.3868 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |