RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCLAG00000006809	Gene ID	102026801	Accession	-
Symbol	RPS27	Alias	-	Full Name	ribosomal protein S27
Status	Confidence	Length	1638 bases	Strand	Plus strand
Position	JH722005.1 : 599762 - 601399	RNA binding domain	Ribosomal_S27e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCLAP00000009832	Ribosomal_S27e	PF01667	1.8e-30	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
RPS27-201	ENSCLAT00000009961	381	84aa	ENSCLAP00000009832

Gene Model

Click here to download ENSCLAG00000006809's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCLAG00000006809's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000023400	78.022	73.6264	chinchilla_lanigera	ENSCLAP00000009832	84.5238	79.7619
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000015730	98.8095	96.4286	chinchilla_lanigera	ENSCLAP00000009832	98.8095	96.4286

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	notamacropus_eugenii	ENSMEUP00000006515	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	choloepus_hoffmanni	ENSCHOP00000008462	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	88.0952	88.0952	echinops_telfairi	ENSETEP00000014088	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	97.619	callithrix_jacchus	ENSCJAP00000010716	98.7952	98.7952
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	98.8095	98.8095	callithrix_jacchus	ENSCJAP00000085750	98.8095	98.8095
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	98.8095	97.619	callithrix_jacchus	ENSCJAP00000086318	98.8095	97.619
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	95.2381	94.0476	cercocebus_atys	ENSCATP00000007996	95.2381	94.0476
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	92.8571	92.8571	macaca_fascicularis	ENSMFAP00000011155	82.9787	82.9787
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	macaca_mulatta	ENSMMUP00000023976	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	macaca_nemestrina	ENSMNEP00000010076	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	papio_anubis	ENSPANP00000022744	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	96.4286	gorilla_gorilla	ENSGGOP00000025257	97.619	96.4286
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	98.8095	gorilla_gorilla	ENSGGOP00000021741	100	98.8095
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	pan_paniscus	ENSPPAP00000038655	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	pongo_abelii	ENSPPYP00000000924	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	homo_sapiens	ENSP00000499044	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	88.0952	85.7143	canis_lupus_familiaris	ENSCAFP00845014002	94.8718	92.3077
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	91.6667	91.6667	vulpes_vulpes	ENSVVUP00000001130	78.5714	78.5714
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	96.4286	pan_troglodytes	ENSPTRP00000077042	97.619	96.4286
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	76.1905	75	ursus_americanus	ENSUAMP00000003653	77.1084	75.9036
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	felis_catus	ENSFCAP00000026404	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	92.8571	92.8571	delphinapterus_leucas	ENSDLEP00000001331	93.9759	93.9759
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	95.2381	94.0476	delphinapterus_leucas	ENSDLEP00000022630	96.3855	95.1807
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	86.9048	86.9048	physeter_catodon	ENSPCTP00005009354	84.8837	84.8837
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	95.2381	95.2381	balaenoptera_musculus	ENSBMSP00010016445	97.561	97.561
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	90.4762	90.4762	equus_asinus	ENSEASP00005037140	87.3563	87.3563
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	sus_scrofa	ENSSSCP00000058333	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	83.3333	79.7619	camelus_dromedarius	ENSCDRP00005030344	90.9091	87.013
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	96.4286	95.2381	bos_taurus	ENSBTAP00000052370	96.4286	95.2381
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	capra_hircus	ENSCHIP00000006649	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	86.9048	86.9048	ovis_aries_rambouillet	ENSOARP00020026937	91.25	91.25
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	ochotona_princeps	ENSOPRP00000009807	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	oryctolagus_cuniculus	ENSOCUP00000022234	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	urocitellus_parryii	ENSUPAP00010019060	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	90.4762	90.4762	cricetulus_griseus_chok1gshd	ENSCGRP00001000483	80.8511	80.8511
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	mesocricetus_auratus	ENSMAUP00000019749	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	mus_caroli	MGP_CAROLIEiJ_P0058795	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	mus_musculus	ENSMUSP00000060523	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	94.0476	92.8571	mus_spicilegus	ENSMSIP00000009439	94.0476	92.8571
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	84.5238	84.5238	mus_spicilegus	ENSMSIP00000011522	93.4211	93.4211
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	mus_pahari	MGP_PahariEiJ_P0069755	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	90.4762	90.4762	heterocephalus_glaber_female	ENSHGLP00000039345	84.4444	84.4444
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	90.4762	90.4762	rattus_norvegicus	ENSRNOP00000097240	84.4444	84.4444
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	octodon_degus	ENSODEP00000027017	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	76.1905	75	ursus_maritimus	ENSUMAP00000011354	77.1084	75.9036
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	monodelphis_domestica	ENSMODP00000021571	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	94.0476	92.8571	bos_grunniens	ENSBGRP00000010954	82.2917	81.25
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	84.5238	82.1429	vombatus_ursinus	ENSVURP00010016581	82.5581	80.2326
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	96.4286	95.2381	bos_indicus_hybrid	ENSBIXP00005038409	96.4286	95.2381
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	95.2381	95.2381	microcebus_murinus	ENSMICP00000025845	96.3855	96.3855
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	98.8095	ictidomys_tridecemlineatus	ENSSTOP00000028646	100	98.8095
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	95.2381	94.0476	monodon_monoceros	ENSMMNP00015015731	86.0215	84.9462
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	97.619	otolemur_garnettii	ENSOGAP00000020518	100	97.619
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	90.4762	90.4762	catagonus_wagneri	ENSCWAP00000009202	92.6829	92.6829
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	90.4762	90.4762	catagonus_wagneri	ENSCWAP00000012619	93.8272	93.8272
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	98.8095	98.8095	saimiri_boliviensis_boliviensis	ENSSBOP00000005173	98.8095	98.8095
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	98.8095	98.8095	saimiri_boliviensis_boliviensis	ENSSBOP00000004242	98.8095	98.8095
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	86.9048	84.5238	moschus_moschiferus	ENSMMSP00000020042	86.9048	84.5238
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	96.4286	rhinolophus_ferrumequinum	ENSRFEP00010009498	85.4167	84.375
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	myotis_lucifugus	ENSMLUP00000017201	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	myotis_lucifugus	ENSMLUP00000015671	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	96.4286	95.2381	bison_bison_bison	ENSBBBP00000014409	89.011	87.9121
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	84.5238	83.3333	bison_bison_bison	ENSBBBP00000001400	91.0256	89.7436
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	97.619	sorex_araneus	ENSSARP00000008017	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	86.9048	85.7143	panthera_tigris_altaica	ENSPTIP00000026161	83.908	82.7586
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	97.619	aotus_nancymaae	ENSANAP00000004164	97.619	97.619
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	rhinopithecus_bieti	ENSRBIP00000002884	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	rhinopithecus_bieti	ENSRBIP00000011025	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	90.4762	90.4762	tupaia_belangeri	ENSTBEP00000012147	92.6829	92.6829
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	98.8095	96.4286	chlorocebus_sabaeus	ENSCSAP00000017352	98.8095	96.4286
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	98.8095	prolemur_simus	ENSPSMP00000030728	84	83
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	98.8095	rhinopithecus_roxellana	ENSRROP00000006863	100	98.8095
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	90.4762	90.4762	sciurus_vulgaris	ENSSVLP00005014756	80	80
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	phocoena_sinus	ENSPSNP00000002814	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	89.2857	86.9048	phascolarctos_cinereus	ENSPCIP00000010001	82.4176	80.2198
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	92.8571	89.2857	canis_lupus_dingo	ENSCAFP00020011477	61.4173	59.0551
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	88.0952	85.7143	canis_lupus_dingo	ENSCAFP00020016637	94.8718	92.3077
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	98.8095	96.4286	carlito_syrichta	ENSTSYP00000020153	98.8095	96.4286
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	90.4762	90.4762	cervus_hanglu_yarkandensis	ENSCHYP00000003370	90.4762	90.4762
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	94.0476	92.8571	bos_mutus	ENSBMUP00000000385	74.5283	73.5849
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	96.4286	94.0476	peromyscus_maniculatus_bairdii	ENSPEMP00000032638	96.4286	94.0476
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	58.3333	53.5714	eptatretus_burgeri	ENSEBUP00000007814	68.0556	62.5
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	latimeria_chalumnae	ENSLACP00000008947	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	98.8095	lepisosteus_oculatus	ENSLOCP00000008094	82.3529	81.3726
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	88.0952	85.7143	esox_lucius	ENSELUP00000059320	87.0588	84.7059
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	crocodylus_porosus	ENSCPRP00005003341	84	84
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	laticauda_laticaudata	ENSLLTP00000001704	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	98.8095	98.8095	notechis_scutatus	ENSNSUP00000019901	78.3019	78.3019
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	97.619	meleagris_gallopavo	ENSMGAP00000028148	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	90.4762	90.4762	gallus_gallus	ENSGALP00010040596	47.7987	47.7987
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	97.619	pelodiscus_sinensis	ENSPSIP00000019138	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	97.619	anolis_carolinensis	ENSACAP00000011367	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	erpetoichthys_calabaricus	ENSECRP00000013372	67.7419	67.7419
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	97.619	geospiza_fortis	ENSGFOP00000012650	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	97.619	podarcis_muralis	ENSPMRP00000022742	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	89.2857	88.0952	leptobrachium_leishanense	ENSLLEP00000029984	96.1538	94.8718
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	98.8095	96.4286	ciona_savignyi	ENSCSAVP00000008994	98.8095	96.4286
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	55.9524	55.9524	struthio_camelus_australis	ENSSCUP00000010931	88.6792	88.6792
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	94.0476	88.0952	denticeps_clupeoides	ENSDCDP00000055154	72.4771	67.8899
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	aquila_chrysaetos_chrysaetos	ENSACCP00020004420	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	97.619	naja_naja	ENSNNAP00000006329	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	chelonoidis_abingdonii	ENSCABP00000004686	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	strigops_habroptila	ENSSHBP00005020252	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	gasterosteus_aculeatus	ENSGACP00000004388	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	94.0476	88.0952	scleropages_formosus	ENSSFOP00015053299	64.2276	60.1626
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	97.619	97.619	ficedula_albicollis	ENSFALP00000018263	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	83.3333	79.7619	cyprinus_carpio_carpio	ENSCCRP00000160099	88.6076	84.8101
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	98.8095	98.8095	salvator_merianae	ENSSMRP00000001008	61.0294	61.0294
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	terrapene_carolina_triunguis	ENSTMTP00000021539	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	100	100	taeniopygia_guttata	ENSTGUP00000024702	100	100
ENSCLAG00000006809	chinchilla_lanigera	ENSCLAP00000009832	85.7143	85.7143	anser_brachyrhynchus	ENSABRP00000004937	70.5882	70.5882

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression