| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSCLAG00000005203 | Gene ID |
102029009 |
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
leucine rich pentatricopeptide repeat containing |
| Status |
Confidence |
Length |
105149 bases |
Strand |
Minus strand |
| Position |
JH721901.1 : 11011831 - 11116979 |
RNA binding domain |
PPR_3 , PPR_long , PPR |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSCLAP00000007399 |
PPR_3 |
PF13812 |
4.1e-31 |
1 |
| ENSCLAP00000007399 |
PPR_3 |
PF13812 |
4.1e-31 |
2 |
| ENSCLAP00000007399 |
PPR_3 |
PF13812 |
4.1e-31 |
3 |
| ENSCLAP00000007399 |
PPR_long |
PF17177 |
8.1e-27 |
4 |
| ENSCLAP00000007399 |
PPR |
PF01535 |
8.3e-37 |
5 |
| ENSCLAP00000007399 |
PPR |
PF01535 |
8.3e-37 |
6 |
| ENSCLAP00000007399 |
PPR |
PF01535 |
8.3e-37 |
7 |
| ENSCLAP00000007399 |
PPR |
PF01535 |
8.3e-37 |
8 |
| ENSCLAP00000007399 |
PPR |
PF01535 |
8.3e-37 |
9 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSCLAT00000007516 |
6119 |
1396aa |
ENSCLAP00000007399 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCLAG00000005203 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 71.49 | 64.4699 | choloepus_hoffmanni | ENSCHOP00000003231 | 71.9539 | 64.8882 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 87.3925 | 76.5043 | dasypus_novemcinctus | ENSDNOP00000009798 | 87.7067 | 76.7793 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 57.3782 | 46.6332 | dasypus_novemcinctus | ENSDNOP00000020662 | 75.2113 | 61.1268 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 61.1032 | 53.2951 | erinaceus_europaeus | ENSEEUP00000011323 | 66.3297 | 57.8538 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 87.0344 | 75.6447 | echinops_telfairi | ENSETEP00000005410 | 87.2218 | 75.8076 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 87.5358 | 77.7221 | cercocebus_atys | ENSCATP00000003773 | 83.6413 | 74.2642 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 87.4642 | 78.0086 | macaca_nemestrina | ENSMNEP00000015080 | 87.4016 | 77.9528 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 87.1777 | 78.2235 | mustela_putorius_furo | ENSMPUP00000011706 | 87.1152 | 78.1675 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 86.3897 | 77.4355 | tursiops_truncatus | ENSTTRP00000006060 | 86.5757 | 77.6023 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 84.0974 | 73.1375 | loxodonta_africana | ENSLAFP00000019681 | 83.7973 | 72.8765 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 63.3238 | 55.7307 | procavia_capensis | ENSPCAP00000001447 | 64.3377 | 56.623 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 89.1834 | 80.1576 | capra_hircus | ENSCHIP00000022836 | 89.504 | 80.4457 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 75.4298 | 66.8338 | ochotona_princeps | ENSOPRP00000015336 | 76.0838 | 67.4133 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 86.8911 | 75.7163 | cricetulus_griseus_chok1gshd | ENSCGRP00001015743 | 87.1408 | 75.9339 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 79.7278 | 73.8539 | cavia_porcellus | ENSCPOP00000000178 | 92.5187 | 85.7024 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 89.255 | 80.659 | ictidomys_tridecemlineatus | ENSSTOP00000029316 | 86.9505 | 78.5764 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 80.1576 | 71.8481 | vicugna_pacos | ENSVPAP00000008367 | 83.4452 | 74.7949 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 86.8195 | 77.2206 | otolemur_garnettii | ENSOGAP00000011476 | 87.0065 | 77.3869 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 85.6734 | 75.5014 | nomascus_leucogenys | ENSNLEP00000020435 | 86.7295 | 76.4322 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 88.1089 | 78.9398 | myotis_lucifugus | ENSMLUP00000009670 | 88.172 | 78.9964 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 85.4585 | 77.2206 | pteropus_vampyrus | ENSPVAP00000001898 | 85.5811 | 77.3314 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 70.4871 | 60.5301 | sorex_araneus | ENSSARP00000000394 | 83.7447 | 71.9149 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 86.9628 | 78.8682 | panthera_tigris_altaica | ENSPTIP00000000544 | 87.0875 | 78.9813 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 87.8223 | 77.7937 | microtus_ochrogaster | ENSMOCP00000006424 | 88.0747 | 78.0172 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 87.3209 | 78.2235 | chlorocebus_sabaeus | ENSCSAP00000009186 | 87.196 | 78.1116 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 61.1748 | 41.6189 | petromyzon_marinus | ENSPMAP00000002368 | 64.9924 | 44.2161 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 16.4756 | 11.4613 | eptatretus_burgeri | ENSEBUP00000025786 | 59.4315 | 41.3437 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 75.5731 | 59.384 | latimeria_chalumnae | ENSLACP00000015933 | 73.7247 | 57.9315 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 73.2808 | 56.3037 | lepisosteus_oculatus | ENSLOCP00000020256 | 69.4501 | 53.3605 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 67.2636 | 47.9943 | danio_rerio | ENSDARP00000111776 | 64.271 | 45.859 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 67.765 | 49.4269 | fundulus_heteroclitus | ENSFHEP00000017838 | 66.5728 | 48.5574 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 68.1948 | 49.4986 | xiphophorus_maculatus | ENSXMAP00000018156 | 67.2792 | 48.8339 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 66.4756 | 47.6361 | oryzias_latipes | ENSORLP00000005797 | 64.5341 | 46.2448 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 64.6132 | 46.5616 | astatotilapia_calliptera | ENSACLP00000035182 | 68.9602 | 49.6942 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 48.4241 | 38.9685 | pelodiscus_sinensis | ENSPSIP00000007632 | 77.8802 | 62.6728 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 11.1748 | 9.02579 | pelodiscus_sinensis | ENSPSIP00000017651 | 66.6667 | 53.8462 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 69.6991 | 49.8567 | cyprinodon_variegatus | ENSCVAP00000026988 | 68.4729 | 48.9796 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 24.212 | 17.4069 | oryzias_melastigma | ENSOMEP00000028638 | 65.7588 | 47.2763 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 62.106 | 45.4155 | neolamprologus_brichardi | ENSNBRP00000017258 | 71.9502 | 52.6141 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 25.2865 | 11.6046 | saccharomyces_cerevisiae | YLR067C | 36.5803 | 16.7876 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 67.8367 | 48.9255 | poecilia_formosa | ENSPFOP00000011667 | 67.068 | 48.3711 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 65.4011 | 47.063 | pundamilia_nyererei | ENSPNYP00000001107 | 68.0328 | 48.9568 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 66.3324 | 47.6361 | amphilophus_citrinellus | ENSACIP00000012395 | 69.0015 | 49.5529 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 70.4871 | 50.8596 | amphiprion_ocellaris | ENSAOCP00000002732 | 68.8593 | 49.6851 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 68.4814 | 48.9255 | gasterosteus_aculeatus | ENSGACP00000014169 | 68.6289 | 49.0309 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 70.0573 | 50.4298 | maylandia_zebra | ENSMZEP00005036721 | 68.3438 | 49.1964 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 66.6905 | 48.4241 | tetraodon_nigroviridis | ENSTNIP00000010279 | 67.5127 | 49.021 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 67.9083 | 47.7077 | stegastes_partitus | ENSSPAP00000000169 | 65.742 | 46.1859 |
| ENSCLAG00000005203 | chinchilla_lanigera | ENSCLAP00000007399 | 66.8338 | 47.7794 | amphiprion_percula | ENSAPEP00000004420 | 67.7068 | 48.4035 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
