RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCJPG00005016918	Gene ID	107312882	Accession	-
Symbol		Alias	-	Full Name	uncharacterized LOC107312882
Status	Confidence	Length	7261 bases	Strand	Plus strand
Position	4 : 10836692 - 10843952	RNA binding domain	Sua5_yciO_yrdC
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCJPP00005021124	Sua5_yciO_yrdC	PF01300	3.7e-31	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCJPT00005029056	3840	876aa	ENSCJPP00005021124

Gene Model

Click here to download ENSCJPG00005016918's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCJPG00005016918's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021125	41.3408	24.9162	coturnix_japonica	ENSCJPP00005021124	42.2374	25.4566
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005020296	36.5942	21.7391	coturnix_japonica	ENSCJPP00005021124	11.5297	6.84932

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	93.379	88.9269	anas_platyrhynchos_platyrhynchos	ENSAPLP00000013403	94.2396	89.7465
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	94.4064	91.5525	gallus_gallus	ENSGALP00010015970	93.4463	90.6215
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	66.6667	62.3288	geospiza_fortis	ENSGFOP00000013690	90.1235	84.2593
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	87.4429	79.5662	serinus_canaria	ENSSCAP00000022443	87.844	79.9312
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	94.6347	91.0959	meleagris_gallopavo	ENSMGAP00000020980	93.7783	90.2715
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	87.1005	79.3379	parus_major	ENSPMJP00000016235	87.9032	80.0691
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	80.4795	76.2557	strigops_habroptila	ENSSHBP00005007502	92.6413	87.7792
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	87.7854	80.4795	taeniopygia_guttata	ENSTGUP00000005647	88.5945	81.2212
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	85.6164	81.8493	anser_brachyrhynchus	ENSABRP00000022612	93.985	89.8496
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	85.0457	75	ficedula_albicollis	ENSFALP00000011838	81.7783	72.1186
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	61.8721	47.1461	callorhinchus_milii	ENSCMIP00000009522	66.9963	51.0507
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	77.8539	66.6667	latimeria_chalumnae	ENSLACP00000020012	81.6766	69.9401
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	27.1689	21.9178	lepisosteus_oculatus	ENSLOCP00000018313	64.1509	51.752
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.2329	56.3927	clupea_harengus	ENSCHAP00000052191	70.7483	56.0091
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	70.3196	55.5936	danio_rerio	ENSDARP00000097499	70.3196	55.5936
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.2329	56.0502	carassius_auratus	ENSCARP00000004248	70.7483	55.6689
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.0046	56.621	carassius_auratus	ENSCARP00000043758	74.0476	59.0476
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	70.5479	56.621	astyanax_mexicanus	ENSAMXP00000014280	73.2227	58.7678
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.4886	57.6484	ictalurus_punctatus	ENSIPUP00000022420	75.4157	59.9762
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	69.1781	54.4521	electrophorus_electricus	ENSEEEP00000011633	72.2288	56.8534
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.2603	56.9635	esox_lucius	ENSELUP00000003771	71.0438	56.0045
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.8036	56.8493	oncorhynchus_kisutch	ENSOKIP00005053088	71.1538	56.3348
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.032	57.6484	oncorhynchus_kisutch	ENSOKIP00005049156	69.6468	55.7395
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.8036	56.9635	oncorhynchus_mykiss	ENSOMYP00000099941	71.1538	56.448
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.9178	57.8767	oncorhynchus_mykiss	ENSOMYP00000013193	71.0259	57.159
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.5753	57.3059	salmo_salar	ENSSSAP00000003835	74.5541	59.6908
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	62.5571	49.6575	salmo_salar	ENSSSAP00000078423	68.9308	54.717
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.1461	57.6484	salmo_trutta	ENSSTUP00000076506	63.011	50.349
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.1461	57.1918	salmo_trutta	ENSSTUP00000031491	71.4932	56.6742
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.0046	55.5936	gadus_morhua	ENSGMOP00000006387	71.8245	56.2356
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	60.8447	48.1735	fundulus_heteroclitus	ENSFHEP00000026803	59.1565	46.8368
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	69.4064	55.0228	fundulus_heteroclitus	ENSFHEP00000008782	76.478	60.6289
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	70.7763	55.5936	xiphophorus_maculatus	ENSXMAP00000009434	72.9412	57.2941
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.3744	56.8493	xiphophorus_maculatus	ENSXMAP00000041277	76.0192	59.7122
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.3744	57.5342	oryzias_latipes	ENSORLP00000007759	72.54	57.6659
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.7169	59.1324	cyclopterus_lumpus	ENSCLMP00005040204	74.8531	60.8696
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	70.8904	56.621	oreochromis_niloticus	ENSONIP00000022530	69.8538	55.793
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	60.7306	48.0594	haplochromis_burtoni	ENSHBUP00000000564	70.557	55.8355
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	70.5479	56.621	astatotilapia_calliptera	ENSACLP00000008033	69.9887	56.1721
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	73.1735	59.0183	sparus_aurata	ENSSAUP00010035518	73.5092	59.289
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	74.5434	60.1598	xenopus_tropicalis	ENSXETP00000093914	73.8688	59.6154
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	73.2877	59.0183	lates_calcarifer	ENSLCAP00010032114	73.3714	59.0857
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	77.3973	64.3836	ornithorhynchus_anatinus	ENSOANP00000036126	77.221	64.2369
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.831	59.3607	dicentrarchus_labrax	ENSDLAP00005019217	72.9143	59.4286
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	74.6575	60.274	erpetoichthys_calabaricus	ENSECRP00000018014	75.6069	61.0405
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.0046	56.5069	cyprinodon_variegatus	ENSCVAP00000031692	77.3632	61.5672
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.4886	58.2192	oryzias_melastigma	ENSOMEP00000026074	72.1591	57.9545
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	67.6941	54.6804	neolamprologus_brichardi	ENSNBRP00000017345	74.7793	60.4035
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.6895	57.3059	takifugu_rubripes	ENSTRUP00000007613	72.0183	57.5688
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	70.3196	55.8219	takifugu_rubripes	ENSTRUP00000080176	71.7949	56.993
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.6027	57.6484	kryptolebias_marmoratus	ENSKMAP00000009246	72.3549	57.4516
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.1187	57.0776	kryptolebias_marmoratus	ENSKMAP00000009114	76.8187	61.6523
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	54.4521	42.4658	seriola_dumerili	ENSSDUP00000009421	63.6849	49.6662
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	59.589	47.4886	seriola_dumerili	ENSSDUP00000009437	71.2142	56.7531
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	70.3196	57.6484	seriola_dumerili	ENSSDUP00000009070	76.6169	62.8109
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.347	56.5069	pygocentrus_nattereri	ENSPNAP00000013707	70.3829	55.7432
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	61.9863	49.0868	poecilia_formosa	ENSPFOP00000012202	76.3713	60.4782
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	70.3196	55.3653	poecilia_latipinna	ENSPLAP00000012883	77.0964	60.7009
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.9452	58.5616	scophthalmus_maximus	ENSSMAP00000016409	73.8728	59.3064
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	65.2968	52.7397	cottoperca_gobio	ENSCGOP00000027664	71.0559	57.3913
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	73.4018	58.5616	labrus_bergylta	ENSLBEP00000035004	73.6541	58.7629
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	69.7489	55.9361	amphilophus_citrinellus	ENSACIP00000008958	71.6295	57.4443
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.5753	56.5069	hucho_hucho	ENSHHUP00000065053	70.8475	55.9322
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.7169	58.79	anabas_testudineus	ENSATEP00000007017	72.3042	58.4563
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	21.5753	17.9224	gasterosteus_aculeatus	ENSGACP00000024122	72.6923	60.3846
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.9178	57.9909	gasterosteus_aculeatus	ENSGACP00000024127	74.1176	59.7647
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.4612	56.7352	tetraodon_nigroviridis	ENSTNIP00000011812	75.2404	59.7356
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	61.6438	49.4292	oncorhynchus_tshawytscha	ENSOTSP00005078727	70.4042	56.4537
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	61.6438	49.4292	oncorhynchus_tshawytscha	ENSOTSP00005098376	70.4042	56.4537
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.1187	57.3059	mastacembelus_armatus	ENSMAMP00000013704	72.3577	58.3043
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	70.8904	57.3059	mastacembelus_armatus	ENSMAMP00000013804	74.4604	60.1918
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	14.6119	7.87671	saccharomyces_cerevisiae	YGL169W	30.0469	16.1972
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.2329	57.1918	oryzias_javanicus	ENSOJAP00000003023	72.1387	57.9191
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	66.21	52.8539	amphiprion_ocellaris	ENSAOCP00000007263	72.6817	58.0201
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.4886	57.5342	myripristis_murdjan	ENSMMDP00005015893	73.4104	58.2659
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	68.379	55.137	maylandia_zebra	ENSMZEP00005015238	73.317	59.1187
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	67.1233	54.3379	sander_lucioperca	ENSSLUP00000043623	70.8434	57.3494
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	70.5479	57.1918	sander_lucioperca	ENSSLUP00000043508	73.1361	59.2899
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	69.1781	54.9087	acanthochromis_polyacanthus	ENSAPOP00000004514	70.8772	56.2573
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	69.5205	55.2511	acanthochromis_polyacanthus	ENSAPOP00000024010	70.7317	56.2137
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.8036	57.1918	cyprinus_carpio_carpio	ENSCCRP00000054410	71.3152	56.8027
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.1187	56.621	cyprinus_carpio_carpio	ENSCCRP00000118569	70.4751	56.1086
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	73.516	58.2192	larimichthys_crocea	ENSLCRP00005029285	73.6	58.2857
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	73.2877	59.589	scleropages_formosus	ENSSFOP00015039896	74.1339	60.2771
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.8036	58.3333	scleropages_formosus	ENSSFOP00015006020	72.133	58.6009
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.347	56.1644	sinocyclocheilus_grahami	ENSSGRP00000008375	71.4286	56.2286
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	62.8995	50	sinocyclocheilus_grahami	ENSSGRP00000036636	68.2776	54.2751
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.6027	57.0776	oryzias_sinensis	ENSOSIP00000000541	72.6027	57.0776
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	46.8037	36.758	amphiprion_percula	ENSAPEP00000024599	69.7279	54.7619
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	68.2648	53.7671	amphiprion_percula	ENSAPEP00000020545	71.4456	56.2724
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	69.6347	55.5936	nothobranchius_furzeri	ENSNFUP00015018261	71.6804	57.2268
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	70.7763	55.5936	denticeps_clupeoides	ENSDCDP00000013311	70.6956	55.5302
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.032	58.105	betta_splendens	ENSBSLP00000035369	73.8876	59.6019
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	72.7169	57.6484	paramormyrops_kingsleyae	ENSPKIP00000012059	74.2424	58.8578
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.6895	57.6484	paramormyrops_kingsleyae	ENSPKIP00000035480	72.267	58.1128
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	68.2648	55.0228	pundamilia_nyererei	ENSPNYP00000000330	73.1946	58.9963
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	71.0046	56.3927	cynoglossus_semilaevis	ENSCSEP00000023265	73.9596	58.7396
ENSCJPG00005016918	coturnix_japonica	ENSCJPP00005021124	75.5708	60.9589	leptobrachium_leishanense	ENSLLEP00000015041	75.3129	60.7509

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression