RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCJAG00000077899	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	601 bases	Strand	Plus strand
Position	5 : 141238720 - 141239320	RNA binding domain	Ribosomal_S17e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCJAP00000090316	Ribosomal_S17e	PF00833	1.1e-64	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCJAT00000141200	426	141aa	ENSCJAP00000090316

Gene Model

Click here to download ENSCJAG00000077899's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCJAG00000077899's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090540	89.1473	86.8217	callithrix_jacchus	ENSCJAP00000090316	81.5603	79.4326
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000029658	85.1852	82.963	callithrix_jacchus	ENSCJAP00000090316	81.5603	79.4326
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000053300	82.6772	79.5276	callithrix_jacchus	ENSCJAP00000090316	74.4681	71.6312
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000067100	85.1852	82.963	callithrix_jacchus	ENSCJAP00000090316	81.5603	79.4326

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	81.5603	79.4326	pan_paniscus	ENSPPAP00000034304	46.9388	45.7143
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	82.2695	78.7234	papio_anubis	ENSPANP00000055286	64.8045	62.0112
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	78.0142	76.5957	papio_anubis	ENSPANP00000029430	82.0896	80.597
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	64.539	56.7376	panthera_pardus	ENSPPRP00000001973	55.8282	49.0798
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	63.1206	56.7376	panthera_leo	ENSPLOP00000016284	56.3291	50.6329
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	78.0142	77.305	balaenoptera_musculus	ENSBMSP00010021599	83.3333	82.5758
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	80.8511	80.8511	vulpes_vulpes	ENSVVUP00000007920	73.0769	73.0769
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	80.1418	77.305	marmota_marmota_marmota	ENSMMMP00000001173	82.4818	79.562
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	58.8652	53.9007	ursus_maritimus	ENSUMAP00000012257	64.3411	58.9147
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	80.1418	78.7234	aotus_nancymaae	ENSANAP00000018121	83.0882	81.6176
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	81.5603	79.4326	pan_troglodytes	ENSPTRP00000090922	46.9388	45.7143
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	81.5603	80.1418	canis_lupus_familiaris	ENSCAFP00845004938	37.9538	37.2937
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	71.6312	71.6312	rhinopithecus_bieti	ENSRBIP00000012636	78.2946	78.2946
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	59.5745	54.6099	ursus_americanus	ENSUAMP00000024070	65.1163	59.6899
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	79.4326	79.4326	ursus_americanus	ENSUAMP00000011771	73.6842	73.6842
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	80.1418	78.7234	equus_caballus	ENSECAP00000022453	88.9764	87.4016
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	69.5035	68.0851	cebus_imitator	ENSCCAP00000009702	83.0508	81.3559
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	68.0851	57.4468	caenorhabditis_elegans	T08B2.10.1	73.8462	62.3077
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	73.0496	66.6667	drosophila_melanogaster	FBpp0076207	78.626	71.7557
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	75.8865	70.2128	ciona_intestinalis	ENSCINP00000011146	80.4511	74.4361
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	80.1418	76.5957	petromyzon_marinus	ENSPMAP00000005665	84.9624	81.203
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	80.1418	75.8865	eptatretus_burgeri	ENSEBUP00000017370	67.2619	63.6905
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	77.305	75.1773	callorhinchus_milii	ENSCMIP00000010478	68.125	66.25
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	80.8511	78.0142	clupea_harengus	ENSCHAP00000058368	85.0746	82.0896
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	81.5603	79.4326	astyanax_mexicanus	ENSAMXP00000042318	85.8209	83.5821
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	78.7234	78.0142	ictalurus_punctatus	ENSIPUP00000022513	62.0112	61.4525
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	82.9787	80.8511	oncorhynchus_kisutch	ENSOKIP00005093690	75.974	74.026
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	75.8865	75.8865	oncorhynchus_mykiss	ENSOMYP00000006071	73.2877	73.2877
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	78.0142	78.0142	salmo_salar	ENSSSAP00000180554	78.5714	78.5714
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	80.8511	78.7234	salmo_trutta	ENSSTUP00000005338	89.7638	87.4016
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	70.922	65.9574	gadus_morhua	ENSGMOP00000009090	82.6446	76.8595
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	82.2695	79.4326	sparus_aurata	ENSSAUP00010002292	71.1656	68.7117
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	78.7234	78.7234	taeniopygia_guttata	ENSTGUP00000025125	63.4286	63.4286
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	65.9574	53.9007	saccharomyces_cerevisiae	YML024W	68.3824	55.8824
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	65.9574	53.9007	saccharomyces_cerevisiae	YDR447C	68.3824	55.8824
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	58.156	49.6454	salvator_merianae	ENSSMRP00000020772	71.9298	61.4035
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	79.4326	77.305	kryptolebias_marmoratus	ENSKMAP00000023627	61.8785	60.221
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	74.4681	72.3404	cottoperca_gobio	ENSCGOP00000010324	77.2059	75
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	78.0142	78.0142	hucho_hucho	ENSHHUP00000031989	79.7101	79.7101
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	80.1418	76.5957	scophthalmus_maximus	ENSSMAP00000069386	78.4722	75
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	78.0142	77.305	oryzias_sinensis	ENSOSIP00000034561	82.0896	81.3433
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	68.7943	67.3759	chelonoidis_abingdonii	ENSCABP00000029349	56.0694	54.9133
ENSCJAG00000077899	callithrix_jacchus	ENSCJAP00000090316	83.6879	81.5603	oncorhynchus_tshawytscha	ENSOTSP00005073287	67.0455	65.3409

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression