RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCHYG00000019762	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	913 bases	Strand	Minus strand
Position	WMHW01000070.1 : 134348 - 135260	RNA binding domain	Ribosomal_S4 , S4
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCHYP00000029541	Ribosomal_S4	PF00163	9.5e-17	1
ENSCHYP00000029541	S4	PF01479	1.6e-09	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCHYT00000033532	552	183aa	ENSCHYP00000029541

Gene Model

Click here to download ENSCHYG00000019762's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCHYG00000019762's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCHYG00000019762	cervus_hanglu_yarkandensis	ENSCHYP00000020157	67.3913	46.1957	cervus_hanglu_yarkandensis	ENSCHYP00000029541	67.7596	46.4481

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCHYG00000019762	cervus_hanglu_yarkandensis	ENSCHYP00000029541	69.9454	50.2732	saccharomyces_cerevisiae	YHR148W	69.9454	50.2732

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression