RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCHYG00000013526	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	384 bases	Strand	Minus strand
Position	18 : 107013772 - 107014155	RNA binding domain	Ribosomal_L37ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCHYP00000020198	Ribosomal_L37ae	PF01780	6.1e-18	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCHYT00000022916	252	83aa	ENSCHYP00000020198

Gene Model

Click here to download ENSCHYG00000013526's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCHYG00000013526's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCHYG00000013526

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCHYG00000013526	cervus_hanglu_yarkandensis	ENSCHYP00000020198	40.9639	33.7349	panthera_leo	ENSPLOP00000021907	56.6667	46.6667
ENSCHYG00000013526	cervus_hanglu_yarkandensis	ENSCHYP00000020198	48.1928	37.3494	delphinapterus_leucas	ENSDLEP00000016733	38.835	30.0971
ENSCHYG00000013526	cervus_hanglu_yarkandensis	ENSCHYP00000020198	31.3253	24.0964	physeter_catodon	ENSPCTP00005007934	22.0339	16.9492
ENSCHYG00000013526	cervus_hanglu_yarkandensis	ENSCHYP00000020198	42.1687	36.1446	sus_scrofa	ENSSSCP00000081296	64.8148	55.5556
ENSCHYG00000013526	cervus_hanglu_yarkandensis	ENSCHYP00000020198	40.9639	30.1205	sus_scrofa	ENSSSCP00000077740	37.7778	27.7778
ENSCHYG00000013526	cervus_hanglu_yarkandensis	ENSCHYP00000020198	49.3976	44.5783	bos_taurus	ENSBTAP00000060778	61.194	55.2239
ENSCHYG00000013526	cervus_hanglu_yarkandensis	ENSCHYP00000020198	43.3735	33.7349	phascolarctos_cinereus	ENSPCIP00000015040	51.4286	40
ENSCHYG00000013526	cervus_hanglu_yarkandensis	ENSCHYP00000020198	46.988	37.3494	monodon_monoceros	ENSMMNP00015002020	40.625	32.2917
ENSCHYG00000013526	cervus_hanglu_yarkandensis	ENSCHYP00000020198	48.1928	37.3494	phocoena_sinus	ENSPSNP00000003759	41.6667	32.2917

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression