RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCHYG00000003590	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1219 bases	Strand	Minus strand
Position	8 : 10876532 - 10877750	RNA binding domain	Ribosomal_L37ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCHYP00000005738	Ribosomal_L37ae	PF01780	2.1e-25	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCHYT00000006406	183	60aa	ENSCHYP00000005738

Gene Model

Click here to download ENSCHYG00000003590's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCHYG00000003590's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000037656	76.3889	75	cervus_hanglu_yarkandensis	ENSCHYP00000005738	91.6667	90
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000023303	66.6667	64.1026	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	83.3333
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000004611	52.9412	51.9608	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	sarcophilus_harrisii	ENSSHAP00000041769	46.9027	46.0177
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	73.3333	70	pan_troglodytes	ENSPTRP00000093619	57.1429	54.5455
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	80	75	canis_lupus_familiaris	ENSCAFP00845025779	81.3559	76.2712
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	76.6667	76.6667	vulpes_vulpes	ENSVVUP00000015819	79.3103	79.3103
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333	ailuropoda_melanoleuca	ENSAMEP00000024358	58.6957	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	81.6667	78.3333	balaenoptera_musculus	ENSBMSP00010030043	45.7944	43.9252
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	85	83.3333	loxodonta_africana	ENSLAFP00000024159	56.044	54.9451
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	85	camelus_dromedarius	ENSCDRP00005012900	71.6216	68.9189
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	85	camelus_dromedarius	ENSCDRP00005013843	66.6667	65.3846
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	ovis_aries_rambouillet	ENSOARP00020009900	60.9195	59.7701
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	ovis_aries_rambouillet	ENSOARP00020023040	64.6341	63.4146
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	73.3333	71.6667	rattus_norvegicus	ENSRNOP00000094331	67.6923	66.1538
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	81.6667	75	cavia_porcellus	ENSCPOP00000027907	44.9541	41.2844
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	microcebus_murinus	ENSMICP00000038552	55.2083	54.1667
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	81.6667	saimiri_boliviensis_boliviensis	ENSSBOP00000007541	69.3333	65.3333
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	68.3333	65	bison_bison_bison	ENSBBBP00000000291	42.268	40.2062
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	85	83.3333	catagonus_wagneri	ENSCWAP00000016301	61.4458	60.241
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	75	71.6667	bos_mutus	ENSBMUP00000033969	51.1364	48.8636
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	81.6667	78.3333	cebus_imitator	ENSCCAP00000028291	83.0508	79.661
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	prolemur_simus	ENSPSMP00000035209	55.2083	54.1667
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	pteropus_vampyrus	ENSPVAP00000005767	58.2418	57.1429
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	microtus_ochrogaster	ENSMOCP00000002350	55.2083	54.1667
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	80	75	canis_lupus_dingo	ENSCAFP00020013361	81.3559	76.2712
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	81.6667	canis_lupus_dingo	ENSCAFP00020018196	76.4706	72.0588
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333	petromyzon_marinus	ENSPMAP00000000001	58.6957	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	78.3333	eptatretus_burgeri	ENSEBUP00000008712	42.623	38.5246
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	85	callorhinchus_milii	ENSCMIP00000038383	25.9804	25
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	latimeria_chalumnae	ENSLACP00000013146	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333	clupea_harengus	ENSCHAP00000043701	50	49.0741
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	86.6667	danio_rerio	ENSDARP00000149337	58.6957	56.5217
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333	carassius_auratus	ENSCARP00000007525	58.6957	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	85	carassius_auratus	ENSCARP00000020048	54.0816	52.0408
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	85	carassius_auratus	ENSCARP00000127999	54.0816	52.0408
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	86.6667	astyanax_mexicanus	ENSAMXP00000044376	58.6957	56.5217
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333	ictalurus_punctatus	ENSIPUP00000032395	58.6957	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	85	electrophorus_electricus	ENSEEEP00000002593	55.7895	53.6842
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333	esox_lucius	ENSELUP00000034166	58.6957	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333	salmo_salar	ENSSSAP00000168002	12.2172	11.991
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	gadus_morhua	ENSGMOP00000047570	57.6087	56.5217
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	86.6667	fundulus_heteroclitus	ENSFHEP00000016949	56.5217	56.5217
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	86.6667	poecilia_reticulata	ENSPREP00000031565	55.3191	55.3191
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	xiphophorus_maculatus	ENSXMAP00000022527	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	86.6667	oryzias_latipes	ENSORLP00000014370	57.7778	57.7778
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333	cyclopterus_lumpus	ENSCLMP00005030659	58.6957	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	48.3333	48.3333	oreochromis_niloticus	ENSONIP00000032425	42.6471	42.6471
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	86.6667	haplochromis_burtoni	ENSHBUP00000034754	57.7778	57.7778
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	astatotilapia_calliptera	ENSACLP00000026553	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	81.6667	80	sparus_aurata	ENSSAUP00010064465	53.2609	52.1739
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	83.3333	80	xenopus_tropicalis	ENSXETP00000067902	62.5	60
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	lates_calcarifer	ENSLCAP00010008751	50.9615	50.9615
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	86.6667	dicentrarchus_labrax	ENSDLAP00005057152	61.1765	61.1765
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	cyprinodon_variegatus	ENSCVAP00000013185	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	83.3333	80	anolis_carolinensis	ENSACAP00000005447	54.9451	52.7473
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	oryzias_melastigma	ENSOMEP00000028375	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	neolamprologus_brichardi	ENSNBRP00000020778	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	86.6667	naja_naja	ENSNNAP00000006425	67.5	65
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	seriola_dumerili	ENSSDUP00000002450	58.2418	58.2418
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	86.6667	pygocentrus_nattereri	ENSPNAP00000001238	34.1772	32.9114
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	poecilia_latipinna	ENSPLAP00000016918	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	poecilia_formosa	ENSPFOP00000014682	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	86.6667	scophthalmus_maximus	ENSSMAP00000021009	54.7368	54.7368
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	cottoperca_gobio	ENSCGOP00000025482	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	labrus_bergylta	ENSLBEP00000005568	43.0894	43.0894
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	hucho_hucho	ENSHHUP00000068733	73.6111	72.2222
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	86.6667	sinocyclocheilus_grahami	ENSSGRP00000067018	58.6957	56.5217
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	gasterosteus_aculeatus	ENSGACP00000016501	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333	acanthochromis_polyacanthus	ENSAPOP00000026370	58.6957	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	48.3333	48.3333	anabas_testudineus	ENSATEP00000054710	42.6471	42.6471
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	86.6667	larimichthys_crocea	ENSLCRP00005034140	56.5217	56.5217
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	denticeps_clupeoides	ENSDCDP00000000987	55.2083	54.1667
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	86.6667	amphiprion_percula	ENSAPEP00000030792	34.8993	34.8993
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333	hippocampus_comes	ENSHCOP00000011939	58.6957	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	oncorhynchus_tshawytscha	ENSOTSP00005079885	68.8312	67.5325
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	oryzias_sinensis	ENSOSIP00000014190	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	86.6667	betta_splendens	ENSBSLP00000050988	58.6957	56.5217
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	pundamilia_nyererei	ENSPNYP00000022426	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	86.6667	tetraodon_nigroviridis	ENSTNIP00000010730	57.6087	56.5217
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	48.3333	48.3333	nothobranchius_furzeri	ENSNFUP00015025358	42.6471	42.6471
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	stegastes_partitus	ENSSPAP00000004318	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	85	cynoglossus_semilaevis	ENSCSEP00000013732	56.5217	55.4348
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	90	88.3333	myripristis_murdjan	ENSMMDP00005031860	58.6957	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	sander_lucioperca	ENSSLUP00000008945	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	86.6667	maylandia_zebra	ENSMZEP00005014902	57.7778	57.7778
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	seriola_lalandi_dorsalis	ENSSLDP00000005195	57.6087	57.6087
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	86.6667	mastacembelus_armatus	ENSMAMP00000047072	32.5	32.5
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	86.6667	86.6667	amphiprion_ocellaris	ENSAOCP00000023850	35.3741	35.3741
ENSCHYG00000003590	cervus_hanglu_yarkandensis	ENSCHYP00000005738	88.3333	88.3333	oryzias_javanicus	ENSOJAP00000027733	57.6087	57.6087

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression