Description

Ensembl ID ENSCHOG00000008555 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 572 bases Strand Plus strand
Position scaffold_299638 : 262 - 833 RNA binding domain S10_plectin
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCHOP00000007565 S10_plectin PF03501 3.8e-46 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCHOT00000008575 318 106aa ENSCHOP00000007565

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000254078.195578.1955choloepus_hoffmanniENSCHOP0000000756598.113298.1132

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756571.698159.434panthera_pardusENSPPRP0000002313358.015348.0916
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756598.113298.1132loxodonta_africanaENSLAFP0000000717063.030363.0303
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756546.226442.4528ursus_maritimusENSUMAP0000002008032.666730
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528sus_scrofaENSSSCP0000006045461.212159.3939
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756560.377452.8302heterocephalus_glaber_femaleENSHGLP0000005813372.727363.6364
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756598.113298.1132vicugna_pacosENSVPAP0000001062197.196397.1963
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756587.735882.0755phocoena_sinusENSPSNP0000001313056.024152.4096
ENSCHOG00000008555choloepus_hoffmanniENSCHOP000000075655048.1132rattus_norvegicusENSRNOP0000004008635.099333.7748
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756598.113298.1132pteropus_vampyrusENSPVAP0000000152297.196397.1963
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756592.452890.566myotis_lucifugusENSMLUP0000001699058.682657.485
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756571.698159.434panthera_tigris_altaicaENSPTIP0000002538749.032340.6452
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28389.6226petromyzon_marinusENSPMAP0000001017461.212157.5758
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28387.7358eptatretus_burgeriENSEBUP0000002602763.52258.4906
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169895.283callorhinchus_miliiENSCMIP0000004222052.020251.0101
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169894.3396latimeria_chalumnaeENSLACP0000001958058.522756.8182
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528lepisosteus_oculatusENSLOCP0000001217951.530650
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528danio_rerioENSDARP0000004590060.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528clupea_harengusENSCHAP0000001179755.191353.5519
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528carassius_auratusENSCARP0000003508958.04656.3218
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528carassius_auratusENSCARP0000010695760.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28391.5094carassius_auratusENSCARP0000006667144.690342.9204
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528astyanax_mexicanusENSAMXP0000004989860.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528ictalurus_punctatusENSIPUP0000003715460.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528electrophorus_electricusENSEEEP0000001441654.301152.6882
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756593.396289.6226esox_luciusENSELUP0000004017957.558155.2326
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756584.905783.9623oncorhynchus_kisutchENSOKIP0000508901455.900655.2795
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756567.924565.0943oncorhynchus_mykissENSOMYP000000922495047.9167
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339692.4528salmo_salarENSSSAP0000001365842.016841.1765
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339691.5094salmo_salarENSSSAP0000017589339.682538.4921
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339692.4528salmo_salarENSSSAP0000012134154.644853.5519
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339692.4528salmo_salarENSSSAP0000003015358.139556.9767
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339691.5094salmo_truttaENSSTUP0000008703244.052942.7313
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339692.4528salmo_truttaENSSTUP0000004358754.644853.5519
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756592.452889.6226salmo_truttaENSSTUP0000007640353.846252.1978
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339692.4528salmo_truttaENSSTUP0000006039158.479557.3099
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528fundulus_heteroclitusENSFHEP0000003109360.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756593.396288.6792gadus_morhuaENSGMOP0000002645347.142944.7619
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528poecilia_reticulataENSPREP0000001912049.509848.0392
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528xiphophorus_maculatusENSXMAP0000002457360.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528oryzias_latipesENSORLP000000289405048.5149
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756596.226493.3962cyclopterus_lumpusENSCLMP0000503588951.256349.7487
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528oreochromis_niloticusENSONIP0000001856360.11958.3333
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528haplochromis_burtoniENSHBUP0000001003157.714356
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528astatotilapia_callipteraENSACLP0000000103560.11958.3333
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528sparus_aurataENSSAUP0001006587958.381556.6474
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528lates_calcariferENSLCAP0001002101853.439251.8519
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756598.113296.2264xenopus_tropicalisENSXETP0000003312156.830655.7377
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756583.962383.0189chrysemys_picta_belliiENSCPBP0000002523940.639340.1826
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756598.113298.1132chrysemys_picta_belliiENSCPBP0000003938449.760849.7608
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756598.113298.1132sphenodon_punctatusENSSPUP0000000334267.096867.0968
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756598.113298.1132laticauda_laticaudataENSLLTP0000000527450.731750.7317
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169897.1698gallus_gallusENSGALP0001003930662.424262.4242
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169897.1698anas_platyrhynchos_platyrhynchosENSAPLP0000002976852.55152.551
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169897.1698meleagris_gallopavoENSMGAP0000001874063.975263.9752
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169897.1698serinus_canariaENSSCAP0000002223065.605165.6051
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169897.1698parus_majorENSPMJP0000001655539.163539.1635
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169897.1698ficedula_albicollisENSFALP0000002306035.27435.274
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756596.226496.2264taeniopygia_guttataENSTGUP0000000184036.428636.4286
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528cyprinodon_variegatusENSCVAP0000001203560.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528kryptolebias_marmoratusENSKMAP0000002190860.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756596.226493.3962gasterosteus_aculeatusENSGACP0000000651857.303455.618
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528erpetoichthys_calabaricusENSECRP0000000466360.11958.3333
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528oryzias_melastigmaENSOMEP0000002889960.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756586.792486.7924pelodiscus_sinensisENSPSIP0000000516260.130760.1307
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339691.5094scophthalmus_maximusENSSMAP0000006185046.948445.5399
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528seriola_dumeriliENSSDUP0000002616656.741655.0562
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528sinocyclocheilus_grahamiENSSGRP0000004503860.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528sinocyclocheilus_grahamiENSSGRP0000009901451.794950.2564
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28391.5094takifugu_rubripesENSTRUP0000008472146.118744.2922
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528labrus_bergyltaENSLBEP0000003180060.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528seriola_lalandi_dorsalisENSSLDP0000000644160.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756544.339640.566leptobrachium_leishanenseENSLLEP0000000058441.964338.3929
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756593.396290.566leptobrachium_leishanenseENSLLEP0000000660761.111159.2593
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756598.113296.2264leptobrachium_leishanenseENSLLEP0000001986662.650661.4458
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528scleropages_formosusENSSFOP0001507847760.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528scleropages_formosusENSSFOP0001502989560.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28391.5094tetraodon_nigroviridisENSTNIP0000002147760.843458.4337
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169897.1698struthio_camelus_australisENSSCUP0000000817859.883759.8837
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756596.226493.3962sander_luciopercaENSSLUP0000005594561.445859.6386
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169897.1698chelonoidis_abingdoniiENSCABP0000000830465.605165.6051
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756585.849183.0189cynoglossus_semilaevisENSCSEP0000002647158.709756.7742
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528oryzias_javanicusENSOJAP0000000731958.381556.6474
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756596.226493.3962cottoperca_gobioENSCGOP0000000252461.445859.6386
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528pundamilia_nyerereiENSPNYP0000000649657.062155.3672
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528acanthochromis_polyacanthusENSAPOP0000000796360.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528denticeps_clupeoidesENSDCDP0000002972555.801154.1436
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528poecilia_latipinnaENSPLAP0000002539760.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169897.1698strigops_habroptilaENSSHBP0000501667654.787254.7872
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28391.5094cyprinus_carpio_carpioENSCCRP0000003843954.010751.8717
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528cyprinus_carpio_carpioENSCCRP0000003843552.061950.5155
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528oryzias_sinensisENSOSIP000000279415048.5149
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528dicentrarchus_labraxENSDLAP0000501197642.796641.5254
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528myripristis_murdjanENSMMDP0000500209460.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339692.4528oncorhynchus_tshawytschaENSOTSP0000500263743.2942.4242
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756584.905783.0189oncorhynchus_tshawytschaENSOTSP0000503960560.810859.4595
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339691.5094oncorhynchus_tshawytschaENSOTSP0000509018058.479556.7251
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339692.4528oncorhynchus_tshawytschaENSOTSP0000508818458.479557.3099
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528amphiprion_perculaENSAPEP0000003253560.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756549.056646.2264paramormyrops_kingsleyaeENSPKIP0000001441121.311520.082
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528larimichthys_croceaENSLCRP0000505567754.891353.2609
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756566.981163.2075stegastes_partitusENSSPAP0000000132037.368435.2632
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756588.679282.0755mastacembelus_armatusENSMAMP0000000582947.959244.3878
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756596.226492.4528pygocentrus_nattereriENSPNAP0000000667161.445859.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528neolamprologus_brichardiENSNBRP0000001163160.11958.3333
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756584.905784.9057terrapene_carolina_triunguisENSTMTP0000002204445.454545.4545
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756598.113298.1132terrapene_carolina_triunguisENSTMTP0000001594466.24266.242
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528betta_splendensENSBSLP0000000074460.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528maylandia_zebraENSMZEP0000500291553.157951.5789
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528poecilia_formosaENSPFOP0000001513560.843459.0361
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528anabas_testudineusENSATEP0000005582645.089343.75
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528nothobranchius_furzeriENSNFUP0001502439156.111154.4444
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756597.169897.1698aquila_chrysaetos_chrysaetosENSACCP0002001979562.048262.0482
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339692.4528hucho_huchoENSHHUP0000004755452.910151.8519
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756594.339691.5094hippocampus_comesENSHCOP0000001873472.463870.2899
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28391.5094amphilophus_citrinellusENSACIP0000001388258.04655.7471
ENSCHOG00000008555choloepus_hoffmanniENSCHOP0000000756595.28392.4528amphiprion_ocellarisENSAOCP0000001634560.843459.0361

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression