Description

Ensembl ID ENSCGRG00015004840 Gene ID 100760243 Accession -
Symbol Alias - Full Name 5'-3' exoribonuclease 1
Status Confidence Length 105718 bases Strand Minus strand
Position RAZU01000152.1 : 2640861 - 2746578 RNA binding domain SH3_12 , XRN_N , XRN1_D1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCGRP00015006619 SH3_12 PF18129 1.6e-19 1
ENSCGRP00015006619 XRN_N PF03159 4.9e-94 2
ENSCGRP00015006619 XRN1_D1 PF18332 3.9e-34 3
ENSCGRP00015006635 XRN_N PF03159 2.2e-94 1
ENSCGRP00015006635 XRN1_D1 PF18332 5.4e-07 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Xrn1-201 ENSCGRT00015008146 3109 969aa ENSCGRP00015006635
Xrn1-203 ENSCGRT00015083031 6162 1693aa ENSCGRP00015042291
Xrn1-202 ENSCGRT00015008129 6381 1726aa ENSCGRP00015006619

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCGRG00015004840

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCGRG00015004840

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression