Description

Ensembl ID ENSCGRG00001021613 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 885 bases Strand Plus strand
Position scaffold_21 : 30007274 - 30008158 RNA binding domain zf-U1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCGRP00001023354 zf-U1 PF06220 1.2e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCGRT00001027600 456 151aa ENSCGRP00001023354

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102170264.761959.0476cricetulus_griseus_chok1gshdENSCGRP0000102335445.033141.0596
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000101242071.171264.8649cricetulus_griseus_chok1gshdENSCGRP0000102335452.317947.6821

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335460.264956.9536echinops_telfairiENSETEP0000000993672.222268.254
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335447.682144.3709macaca_fascicularisENSMFAP0000002538051.063847.5177
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335451.655648.3444macaca_nemestrinaENSMNEP0000000668850.322647.0968
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335447.682144.3709papio_anubisENSPANP0000005418151.063847.5177
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335466.225262.2517pan_troglodytesENSPTRP0000007119875.18870.6767
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335472.847766.2252canis_lupus_familiarisENSCAFP0084502892069.620363.2911
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335466.887461.5894vulpes_vulpesENSVVUP0000001355161.212156.3636
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335480.794776.8212vulpes_vulpesENSVVUP0000001439976.729672.956
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335453.642446.3576ursus_americanusENSUAMP0000001625941.752636.0825
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335454.304649.0066sus_scrofaENSSSCP0000004824074.545567.2727
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335446.357639.7351urocitellus_parryiiENSUPAP0001001465061.403552.6316
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335470.860962.2517dipodomys_ordiiENSDORP0000001882161.494354.023
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335452.980145.6954ursus_maritimusENSUMAP0000000883641.237135.567
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335447.682145.0331saimiri_boliviensis_boliviensisENSSBOP000000263217268
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335476.821269.5364rattus_norvegicusENSRNOP0000008922973.885466.879
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335467.549761.5894rattus_norvegicusENSRNOP0000009067458.620753.4483
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335471.523266.8874jaculus_jaculusENSJJAP000000185757570.1389
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335467.549760.9272canis_lupus_dingoENSCAFP0002000220962.195156.0976
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335472.185466.8874canis_lupus_dingoENSCAFP0002003096063.742759.0643
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335464.900760.9272microtus_ochrogasterENSMOCP0000002706966.666762.585
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335454.966951.6556mesocricetus_auratusENSMAUP0000000261879.047674.2857
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335460.927257.6159heterocephalus_glaber_femaleENSHGLP0000002921877.966173.7288
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335461.589457.6159peromyscus_maniculatus_bairdiiENSPEMP0000001671678.813673.7288
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335475.496769.5364carlito_syrichtaENSTSYP0000001508360.638355.8511
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335452.980143.0464drosophila_melanogasterFBpp008313455.172444.8276
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335460.927256.2914anser_brachyrhynchusENSABRP0000001290977.310971.4286
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335461.589456.2914naja_najaENSNNAP0000000810278.813672.0339
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335449.668945.0331anolis_carolinensisENSACAP0000002349661.983556.1983
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335461.589456.9536struthio_camelus_australisENSSCUP0000000818478.813672.8814
ENSCGRG00001021613cricetulus_griseus_chok1gshdENSCGRP0000102335461.589456.9536ficedula_albicollisENSFALP0000001670878.151372.2689

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression