Welcome to
RBP World!
Description
Ensembl ID | ENSCGRG00001001145 | Gene ID | 100754802 | Accession | - |
Symbol | Ddx43 | Alias | - | Full Name | DEAD-box helicase 43 |
Status | Confidence | Length | 20284 bases | Strand | Minus strand |
Position | scaffold_5 : 41451734 - 41472017 | RNA binding domain | DEAD , KH_1 | ||
Summary | N.A. |
RNA binding proteomes (RBPomes)
Pubmed ID | Full Name | Cell | Author | Time | Doi |
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Literatures on RNA binding capacity
Pubmed ID | Title | Author | Time | Journal |
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Transcripts
Name | Transcript ID | bp | Protein | Translation ID |
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Ddx43-201 | ENSCGRT00001001523 | 1941 | 646aa | ENSCGRP00001001429 |
Phenotypes
ensgID | Trait | pValue | Pubmed ID |
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GWAS
ensgID | SNP | Chromosome | Position | Trait | PubmedID | Or or BEAT | EFO ID |
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Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID | Source | Target | ||||||
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Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001011380 | 31.0811 | 18.2432 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 35.6037 | 20.8978 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001027388 | 41.3793 | 25.0958 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 33.4365 | 20.2786 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001006866 | 50.9852 | 30.2956 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 32.0433 | 19.0402 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001026959 | 49.0909 | 29.6104 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 29.257 | 17.6471 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001733 | 50.5855 | 26.9321 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 33.4365 | 17.8019 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001023227 | 42.029 | 22.1532 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 31.4241 | 16.5635 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001772 | 32.8333 | 19.8333 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 30.4954 | 18.4211 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001013989 | 36.9146 | 23.8292 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 41.4861 | 26.7802 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001006989 | 43.5417 | 27.2917 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 32.3529 | 20.2786 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001014455 | 31.599 | 19.5431 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 38.5449 | 23.839 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001014420 | 43.8413 | 23.5908 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 32.5077 | 17.4923 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001019636 | 35.2294 | 21.1009 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 29.7214 | 17.8019 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001005411 | 25.0855 | 14.2531 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 34.0557 | 19.3498 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001021348 | 32.7446 | 19.837 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 37.3065 | 22.6006 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001013899 | 45.7143 | 29.2308 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 32.1981 | 20.5882 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001024199 | 41.3897 | 26.435 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 42.4149 | 27.0898 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001002245 | 43.3099 | 28.5211 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 38.0805 | 25.0774 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001025466 | 47.2393 | 33.7423 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 47.678 | 34.0557 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001012912 | 30.9859 | 18.0282 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 34.0557 | 19.8142 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001025262 | 48.6618 | 27.4939 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 30.9598 | 17.4923 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001018235 | 45.8445 | 26.5416 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 26.4706 | 15.3251 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001015745 | 32.2539 | 20.2073 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 38.5449 | 24.1486 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001017925 | 30.8005 | 18.9959 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 35.1393 | 21.6718 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001008543 | 37.1951 | 21.189 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 37.7709 | 21.517 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001015621 | 37.3514 | 21.7317 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 34.0557 | 19.8142 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001014113 | 34.188 | 21.2454 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 43.3437 | 26.935 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001010911 | 40.6807 | 23.6629 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 38.8545 | 22.6006 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001016923 | 39.4984 | 26.0188 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 39.0093 | 25.6966 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001026032 | 44.0994 | 27.3292 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 32.9721 | 20.4334 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001013521 | 51.3821 | 36.9106 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 48.9164 | 35.1393 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001012824 | 24.2131 | 15.2542 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 30.9598 | 19.5046 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001005617 | 34.2229 | 19.1523 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 33.7461 | 18.8854 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001023798 | 44.5946 | 26.4865 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 25.5418 | 15.1703 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001017226 | 46.9534 | 23.6559 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 20.2786 | 10.2167 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001007063 | 29.6963 | 17.3228 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 40.8669 | 23.839 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001013751 | 28.9474 | 17.5057 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 39.1641 | 23.6842 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001027033 | 30.5529 | 18.8167 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 48.7616 | 30.031 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001023106 | 16.9562 | 9.51199 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 31.7337 | 17.8019 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001024592 | 50.3685 | 31.2039 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 31.7337 | 19.6594 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001022030 | 41.9032 | 25.3756 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 38.8545 | 23.5294 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001007357 | 34.6983 | 22.0905 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 49.8452 | 31.7337 |
Orthologs
Ensembl ID | Source | Target | ||||||
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Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 52.4768 | 47.678 | choloepus_hoffmanni | ENSCHOP00000003062 | 60.2131 | 54.7069 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 90.7121 | 82.8173 | dasypus_novemcinctus | ENSDNOP00000013637 | 90.0154 | 82.1813 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 70.4334 | 63.6223 | echinops_telfairi | ENSETEP00000001531 | 70.5426 | 63.7209 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 83.4365 | 75.2322 | canis_lupus_familiaris | ENSCAFP00845012395 | 89.6839 | 80.8652 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 89.6285 | 80.9598 | vulpes_vulpes | ENSVVUP00000018886 | 89.6285 | 80.9598 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 72.9102 | 66.0991 | ursus_americanus | ENSUAMP00000016179 | 73.3645 | 66.5109 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 90.4025 | 82.8173 | ailuropoda_melanoleuca | ENSAMEP00000008287 | 89.9846 | 82.4345 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 90.2477 | 82.8173 | mustela_putorius_furo | ENSMPUP00000004309 | 89.9691 | 82.5617 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 85.9133 | 76.935 | felis_catus | ENSFCAP00000019694 | 88.3758 | 79.1401 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 75.0774 | 65.0155 | tursiops_truncatus | ENSTTRP00000001404 | 86.7621 | 75.1342 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 87.4613 | 76.4706 | delphinapterus_leucas | ENSDLEP00000005623 | 79.1317 | 69.1877 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 86.3777 | 79.4118 | loxodonta_africana | ENSLAFP00000010669 | 92.5373 | 85.0746 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 90.4025 | 83.4365 | equus_asinus | ENSEASP00005005901 | 92.5515 | 85.42 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 90.4025 | 83.1269 | equus_caballus | ENSECAP00000015590 | 90.9657 | 83.6449 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 87.3065 | 77.709 | sus_scrofa | ENSSSCP00000004631 | 87.9875 | 78.3151 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 89.1641 | 81.2693 | procavia_capensis | ENSPCAP00000005590 | 89.5801 | 81.6485 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 86.3777 | 78.0186 | camelus_dromedarius | ENSCDRP00005016557 | 88.0126 | 79.4953 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 85.9133 | 76.6254 | capra_hircus | ENSCHIP00000017546 | 86.3142 | 76.9829 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 86.0681 | 76.3158 | bos_taurus | ENSBTAP00000029077 | 86.4697 | 76.6719 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 60.6811 | 54.4892 | ochotona_princeps | ENSOPRP00000012342 | 70 | 62.8571 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 88.5449 | 78.9474 | oryctolagus_cuniculus | ENSOCUP00000019339 | 88.8199 | 79.1925 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 93.1889 | 88.2353 | marmota_marmota_marmota | ENSMMMP00000003294 | 93.0448 | 88.0989 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 78.483 | 75.2322 | urocitellus_parryii | ENSUPAP00010016252 | 96.3878 | 92.3954 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 91.7957 | 86.6873 | dipodomys_ordii | ENSDORP00000021612 | 91.6538 | 86.5533 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 87.4613 | 84.9845 | mus_pahari | MGP_PahariEiJ_P0024446 | 96.5812 | 93.8462 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 90.5573 | 82.3529 | ursus_maritimus | ENSUMAP00000016740 | 90.1387 | 81.9723 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 97.0588 | 95.356 | mus_spretus | MGP_SPRETEiJ_P0092451 | 97.0588 | 95.356 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 96.7492 | 95.0464 | rattus_norvegicus | ENSRNOP00000066094 | 96.7492 | 95.0464 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 93.0341 | 89.3189 | jaculus_jaculus | ENSJJAP00000010657 | 92.8903 | 89.1808 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 91.9505 | 85.4489 | cavia_porcellus | ENSCPOP00000003602 | 91.8083 | 85.3168 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 82.0433 | 72.9102 | bison_bison_bison | ENSBBBP00000003129 | 82.0433 | 72.9102 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 41.4861 | 37.9257 | tupaia_belangeri | ENSTBEP00000001729 | 49.0842 | 44.8718 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 91.3313 | 84.0557 | myotis_lucifugus | ENSMLUP00000016054 | 90.6298 | 83.4101 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 87.1517 | 76.6254 | monodon_monoceros | ENSMMNP00015025711 | 78.8515 | 69.3277 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 78.3282 | 71.8266 | octodon_degus | ENSODEP00000022058 | 93.0147 | 85.2941 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 84.6749 | 75.5418 | neovison_vison | ENSNVIP00000019398 | 84.9379 | 75.7764 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 83.1269 | 77.5542 | pteropus_vampyrus | ENSPVAP00000011994 | 95.0443 | 88.6726 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 97.0588 | 95.356 | mus_musculus | ENSMUSP00000108994 | 97.0588 | 95.356 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 96.7492 | 94.8916 | mus_caroli | MGP_CAROLIEiJ_P0088814 | 96.7492 | 94.8916 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 85.6037 | 79.1022 | chinchilla_lanigera | ENSCLAP00000014881 | 90.5074 | 83.6334 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 76.7802 | 69.0402 | vicugna_pacos | ENSVPAP00000004605 | 82.392 | 74.0864 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 89.9381 | 81.2693 | canis_lupus_dingo | ENSCAFP00020012453 | 89.9381 | 81.2693 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 83.4365 | 75.2322 | canis_lupus_dingo | ENSCAFP00020003194 | 89.6839 | 80.8652 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 96.13 | 93.9628 | microtus_ochrogaster | ENSMOCP00000013034 | 95.8333 | 93.6728 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 86.0681 | 76.3158 | bos_grunniens | ENSBGRP00000015115 | 86.4697 | 76.6719 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 80.4954 | 73.5294 | sorex_araneus | ENSSARP00000012181 | 94.8905 | 86.6788 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 97.0588 | 95.356 | mus_spicilegus | ENSMSIP00000004701 | 97.0588 | 95.356 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 86.8421 | 75.387 | phocoena_sinus | ENSPSNP00000023826 | 87.5195 | 75.975 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 86.0681 | 75.6966 | cervus_hanglu_yarkandensis | ENSCHYP00000031262 | 86.4697 | 76.0498 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 96.7492 | 93.9628 | mesocricetus_auratus | ENSMAUP00000001940 | 97.0497 | 94.2547 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 74.1486 | 70.8978 | ictidomys_tridecemlineatus | ENSSTOP00000027610 | 96.5726 | 92.3387 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 89.3189 | 79.5666 | panthera_tigris_altaica | ENSPTIP00000020354 | 89.1808 | 79.4436 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 85.9133 | 76.0062 | bos_indicus_hybrid | ENSBIXP00005011141 | 86.3142 | 76.3608 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 89.4737 | 81.5789 | heterocephalus_glaber_female | ENSHGLP00000001449 | 90.7378 | 82.7316 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 91.1765 | 90.0929 | peromyscus_maniculatus_bairdii | ENSPEMP00000028456 | 91.1765 | 90.0929 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 85.2941 | 76.3158 | moschus_moschiferus | ENSMMSP00000020898 | 86.7717 | 77.6378 |
ENSCGRG00001001145 | cricetulus_griseus_chok1gshd | ENSCGRP00001001429 | 94.7368 | 92.1053 | nannospalax_galili | ENSNGAP00000013580 | 94.7368 | 92.1053 |
Gene Ontology
Go ID | Go term | No. evidence | Entries | Species | Category |
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