RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCGOG00000013628	Gene ID	115027473	Accession	-
Symbol		Alias	-	Full Name	eukaryotic translation initiation factor 5A-1-like
Status	Confidence	Length	8545 bases	Strand	Minus strand
Position	22 : 4844658 - 4853202	RNA binding domain	eIF-5a
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCGOP00000029100	eIF-5a	PF01287	3.7e-23	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCGOT00000031272	4285	201aa	ENSCGOP00000029100

Gene Model

Click here to download ENSCGOG00000013628's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCGOG00000013628's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000055232	75.2941	70.5882	cottoperca_gobio	ENSCGOP00000029100	31.8408	29.8507
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000050912	66.5025	50.7389	cottoperca_gobio	ENSCGOP00000029100	67.1642	51.2438
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000013771	81.9355	65.1613	cottoperca_gobio	ENSCGOP00000029100	63.1841	50.2488

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	58.7065	49.2537	fundulus_heteroclitus	ENSFHEP00000032194	72.8395	61.1111
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	45.2736	38.806	poecilia_reticulata	ENSPREP00000018893	82.7273	70.9091
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	45.2736	38.806	poecilia_reticulata	ENSPREP00000018870	82.7273	70.9091
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	69.6517	52.7363	xiphophorus_maculatus	ENSXMAP00000009055	66.6667	50.4762
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.6816	54.7264	cyclopterus_lumpus	ENSCLMP00005019883	84.2105	72.3684
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	64.1791	53.2338	oreochromis_niloticus	ENSONIP00000062490	84.3137	69.9346
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	68.1592	56.2189	oryzias_latipes	ENSORLP00000042733	69.5431	57.3604
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.6816	52.7363	astatotilapia_calliptera	ENSACLP00000010295	83.6601	69.281
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.6816	53.7313	lates_calcarifer	ENSLCAP00010015866	84.2105	71.0526
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	62.6866	50.7463	sparus_aurata	ENSSAUP00010066780	77.3006	62.5767
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.6816	52.7363	haplochromis_burtoni	ENSHBUP00000030333	83.6601	69.281
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.1841	52.2388	dicentrarchus_labrax	ENSDLAP00005066449	83.5526	69.0789
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.1841	53.2338	oryzias_melastigma	ENSOMEP00000015292	81.9355	69.0323
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.6816	52.7363	neolamprologus_brichardi	ENSNBRP00000012684	83.6601	69.281
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.1841	49.7512	poecilia_formosa	ENSPFOP00000011141	81.4103	64.1026
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	60.199	49.2537	takifugu_rubripes	ENSTRUP00000088024	78.0645	63.871
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	40.2985	30.8458	cyprinodon_variegatus	ENSCVAP00000031913	80.198	61.3861
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	40.2985	30.8458	cyprinodon_variegatus	ENSCVAP00000018220	80.198	61.3861
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	67.1642	55.7214	gasterosteus_aculeatus	ENSGACP00000014561	88.8158	73.6842
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.6816	52.7363	pundamilia_nyererei	ENSPNYP00000007810	83.6601	69.281
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	58.7065	47.7612	poecilia_latipinna	ENSPLAP00000006107	79.1946	64.4295
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.6816	54.2289	stegastes_partitus	ENSSPAP00000002384	83.6601	71.2418
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	64.6766	55.7214	anabas_testudineus	ENSATEP00000054103	84.9673	73.2026
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	45.7711	39.801	amphilophus_citrinellus	ENSACIP00000007734	84.4037	73.3945
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	67.6617	55.2239	amphiprion_percula	ENSAPEP00000016170	72.7273	59.3583
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.6816	53.7313	amphiprion_ocellaris	ENSAOCP00000015267	83.6601	70.5882
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.6816	52.7363	maylandia_zebra	ENSMZEP00005018749	83.6601	69.281
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	61.194	51.7413	hippocampus_comes	ENSHCOP00000011238	80.3922	67.9739
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	62.1891	51.7413	oryzias_javanicus	ENSOJAP00000029580	71.8391	59.7701
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	60.199	49.7512	scophthalmus_maximus	ENSSMAP00000026689	78.5714	64.9351
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.1841	54.2289	kryptolebias_marmoratus	ENSKMAP00000008059	83.0065	71.2418
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.1841	53.7313	oryzias_sinensis	ENSOSIP00000018603	83.0065	70.5882
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	43.2836	33.8308	cynoglossus_semilaevis	ENSCSEP00000005061	77.6786	60.7143
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.1841	54.7264	nothobranchius_furzeri	ENSNFUP00015053852	83.0065	71.8954
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	61.194	48.2587	labrus_bergylta	ENSLBEP00000027664	79.8701	62.987
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	64.1791	54.7264	betta_splendens	ENSBSLP00000048314	84.3137	71.8954
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	66.6667	53.7313	sander_lucioperca	ENSSLUP00000042737	88.1579	71.0526
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	64.6766	54.7264	mastacembelus_armatus	ENSMAMP00000036607	84.9673	71.8954
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	60.6965	50.7463	tetraodon_nigroviridis	ENSTNIP00000009440	80.7947	67.5497
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	64.1791	55.2239	acanthochromis_polyacanthus	ENSAPOP00000007646	84.3137	72.549
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	60.199	46.2687	caenorhabditis_elegans	F54C9.1.2	75.1553	57.764
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	61.194	45.7711	caenorhabditis_elegans	T05G5.10a.1	63.0769	47.1795
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	62.6866	46.7662	drosophila_melanogaster	FBpp0072082	79.2453	59.1195
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	59.204	45.7711	saccharomyces_cerevisiae	YEL034W	75.7962	58.5987
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	60.199	46.2687	saccharomyces_cerevisiae	YJR047C	77.0701	59.2357
ENSCGOG00000013628	cottoperca_gobio	ENSCGOP00000029100	63.6816	51.7413	myripristis_murdjan	ENSMMDP00005008481	81.0127	65.8228

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression