RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCDRG00005008795	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	156 bases	Strand	Plus strand
Position	11 : 51394047 - 51394202	RNA binding domain	Ribosomal_L39
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCDRP00005012364	Ribosomal_L39	PF00832	4.1e-19	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCDRT00005013715	156	51aa	ENSCDRP00005012364

Gene Model

Click here to download ENSCDRG00005008795's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCDRG00005008795's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005029103	88.2353	82.3529	camelus_dromedarius	ENSCDRP00005012364	88.2353	82.3529
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005017297	88.2353	80.3922	camelus_dromedarius	ENSCDRP00005012364	88.2353	80.3922
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005000023	90.1961	86.2745	camelus_dromedarius	ENSCDRP00005012364	90.1961	86.2745
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005025100	86	80	camelus_dromedarius	ENSCDRP00005012364	84.3137	78.4314
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005019078	92.1569	88.2353	camelus_dromedarius	ENSCDRP00005012364	92.1569	88.2353

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	88.2353	macaca_nemestrina	ENSMNEP00000000068	92.1569	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	86.2745	papio_anubis	ENSPANP00000052249	92.1569	86.2745
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	90.1961	mandrillus_leucophaeus	ENSMLEP00000004051	92.1569	90.1961
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	86.2745	mandrillus_leucophaeus	ENSMLEP00000000310	92	88
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	86.2745	canis_lupus_familiaris	ENSCAFP00845038020	90.1961	86.2745
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	86.2745	vulpes_vulpes	ENSVVUP00000031553	92	88
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	90.1961	vulpes_vulpes	ENSVVUP00000042481	92.1569	90.1961
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	90.1961	ailuropoda_melanoleuca	ENSAMEP00000027362	92.1569	90.1961
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	90.1961	ailuropoda_melanoleuca	ENSAMEP00000042081	92.1569	90.1961
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	88.2353	80.3922	panthera_pardus	ENSPPRP00000028600	88.2353	80.3922
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	88.2353	delphinapterus_leucas	ENSDLEP00000019728	92.1569	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	86.2745	84.3137	physeter_catodon	ENSPCTP00005024943	86.2745	84.3137
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	86.2745	82.3529	physeter_catodon	ENSPCTP00005001258	86.2745	82.3529
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	88.2353	86.2745	sus_scrofa	ENSSSCP00000079402	60.8108	59.4595
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	86.2745	mesocricetus_auratus	ENSMAUP00000016732	90.1961	86.2745
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	90.1961	ursus_maritimus	ENSUMAP00000020873	92.1569	90.1961
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	88.2353	mus_caroli	MGP_CAROLIEiJ_P0040319	90.1961	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	86.2745	84.3137	monodon_monoceros	ENSMMNP00015007625	88	86
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	88.2353	mus_musculus	ENSMUSP00000041794	90.1961	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	86.2745	86.2745	vombatus_ursinus	ENSVURP00010023899	89.7959	89.7959
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	88.2353	phascolarctos_cinereus	ENSPCIP00000029128	92.1569	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	88.2353	86.2745	nannospalax_galili	ENSNGAP00000010044	88.2353	86.2745
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	88.2353	80.3922	nannospalax_galili	ENSNGAP00000005947	88.2353	80.3922
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	90.1961	bos_mutus	ENSBMUP00000006520	92.1569	90.1961
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	88.2353	octodon_degus	ENSODEP00000026656	92.1569	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	88.2353	canis_lupus_dingo	ENSCAFP00020003056	90.1961	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	84.3137	76.4706	bison_bison_bison	ENSBBBP00000027716	86	78
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	90.1961	cervus_hanglu_yarkandensis	ENSCHYP00000037890	92.1569	90.1961
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	88.2353	86.2745	jaculus_jaculus	ENSJJAP00000005058	88.2353	86.2745
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	88.2353	86.2745	myotis_lucifugus	ENSMLUP00000019372	90	88
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	88.2353	rhinopithecus_roxellana	ENSRROP00000005595	92.1569	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	88.2353	rattus_norvegicus	ENSRNOP00000095440	90.1961	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	86.2745	heterocephalus_glaber_female	ENSHGLP00000035559	33.8235	32.3529
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	88.2353	86.2745	heterocephalus_glaber_female	ENSHGLP00000045378	88.2353	86.2745
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	86.2745	82.3529	panthera_tigris_altaica	ENSPTIP00000003443	86.2745	82.3529
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	84.3137	mus_spicilegus	ENSMSIP00000026637	92.1569	84.3137
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	88.2353	84.3137	microtus_ochrogaster	ENSMOCP00000001978	88.2353	84.3137
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	88.2353	88.2353	carlito_syrichta	ENSTSYP00000024482	88.2353	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	88.2353	chinchilla_lanigera	ENSCLAP00000025602	90.1961	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	88.2353	aotus_nancymaae	ENSANAP00000001922	90.1961	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	86.2745	84.3137	aotus_nancymaae	ENSANAP00000001981	86.2745	84.3137
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	90.1961	aotus_nancymaae	ENSANAP00000027184	92.1569	90.1961
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	88.2353	mus_spretus	MGP_SPRETEiJ_P0042163	90.1961	88.2353
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	78.4314	76.4706	cricetulus_griseus_chok1gshd	ENSCGRP00001006034	86.9565	84.7826
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	86.2745	cricetulus_griseus_chok1gshd	ENSCGRP00001002816	90.1961	86.2745
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	88.2353	peromyscus_maniculatus_bairdii	ENSPEMP00000031776	80.7018	78.9474
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	92.1569	90.1961	neovison_vison	ENSNVIP00000016864	92.1569	90.1961
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	86.2745	otolemur_garnettii	ENSOGAP00000017379	90.1961	86.2745
ENSCDRG00005008795	camelus_dromedarius	ENSCDRP00005012364	90.1961	82.3529	rhinolophus_ferrumequinum	ENSRFEP00010010412	90.1961	82.3529

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression