Description

Ensembl ID ENSCCRG00020040175 Gene ID Accession -
Symbol Alias - Full Name RNA binding motif protein 39b
Status Confidence Length 9586 bases Strand Minus strand
Position SAUJ01048427.1 : 67116 - 76701 RNA binding domain RRM_1 , RBM39linker
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00020090515 RRM_1 PF00076 4.2e-38 1
ENSCCRP00020090515 RRM_1 PF00076 4.2e-38 2
ENSCCRP00020090515 RBM39linker PF15519 1.8e-28 3
ENSCCRP00020090636 RRM_1 PF00076 4.4e-38 1
ENSCCRP00020090636 RRM_1 PF00076 4.4e-38 2
ENSCCRP00020090636 RBM39linker PF15519 2.9e-25 3
ENSCCRP00020090537 RRM_1 PF00076 5e-38 1
ENSCCRP00020090537 RRM_1 PF00076 5e-38 2
ENSCCRP00020090537 RBM39linker PF15519 4.6e-27 3
ENSCCRP00020090514 RRM_1 PF00076 5.4e-38 1
ENSCCRP00020090514 RRM_1 PF00076 5.4e-38 2
ENSCCRP00020090514 RBM39linker PF15519 1.9e-27 3
ENSCCRP00020090489 RRM_1 PF00076 1.3e-37 1
ENSCCRP00020090489 RRM_1 PF00076 1.3e-37 2
ENSCCRP00020090489 RBM39linker PF15519 2.5e-28 3
ENSCCRP00020090487 RRM_1 PF00076 1.4e-37 1
ENSCCRP00020090487 RRM_1 PF00076 1.4e-37 2
ENSCCRP00020090487 RBM39linker PF15519 2.5e-28 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00020098893 2293 525aa ENSCCRP00020090487
- ENSCCRT00020098895 1947 528aa ENSCCRP00020090489
- ENSCCRT00020098924 1602 413aa ENSCCRP00020090514
- ENSCCRT00020098925 1566 401aa ENSCCRP00020090515
- ENSCCRT00020098950 1599 412aa ENSCCRP00020090537
- ENSCCRT00020099054 1554 397aa ENSCCRP00020090636

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020040175

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020040175

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression