Description

Ensembl ID ENSCCRG00020038443 Gene ID Accession -
Symbol Alias - Full Name splicing factor 3a, subunit 1
Status Confidence Length 5381 bases Strand Plus strand
Position SAUJ01046621.1 : 419436 - 424816 RNA binding domain PRP21_like_P , Surp
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00020083320 PRP21_like_P PF12230 2.3e-50 1
ENSCCRP00020083320 Surp PF01805 4.8e-45 2
ENSCCRP00020083320 Surp PF01805 4.8e-45 3
ENSCCRP00020083328 PRP21_like_P PF12230 3.2e-50 1
ENSCCRP00020083328 Surp PF01805 6.2e-45 2
ENSCCRP00020083328 Surp PF01805 6.2e-45 3
ENSCCRP00020083319 PRP21_like_P PF12230 9.6e-50 1
ENSCCRP00020083319 Surp PF01805 7.3e-45 2
ENSCCRP00020083319 Surp PF01805 7.3e-45 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00020091182 2504 780aa ENSCCRP00020083319
- ENSCCRT00020091183 2135 657aa ENSCCRP00020083320
- ENSCCRT00020091191 2196 731aa ENSCCRP00020083328

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020038443

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020038443

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression