RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCCRG00020035084	Gene ID		Accession	-
Symbol		Alias	-	Full Name	splicing factor SWAP
Status	Confidence	Length	91124 bases	Strand	Plus strand
Position	SAUJ01011846.1 : 19167 - 110290	RNA binding domain	DRY_EERY , Surp
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCCRP00020075276	DRY_EERY	PF09750	8.5e-30	1
ENSCCRP00020075276	Surp	PF01805	7.7e-28	2
ENSCCRP00020075276	Surp	PF01805	7.7e-28	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCCRT00020082560	4214	891aa	ENSCCRP00020075276

Gene Model

Click here to download ENSCCRG00020035084's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCCRG00020035084's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCRG00020035084

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCRG00020035084

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression