RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSCCRG00020033220	Gene ID		Accession	-
Symbol		Alias	-	Full Name	zgc:163098
Status	Confidence	Length	11252 bases	Strand	Plus strand
Position	SAUJ01010360.1 : 1942838 - 1954089	RNA binding domain	RRM_1 , Surp , cwf21 , CID
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCCRP00020071017	RRM_1	PF00076	1.1e-10	1
ENSCCRP00020071017	Surp	PF01805	9.7e-18	2
ENSCCRP00020071017	cwf21	PF08312	6.8e-09	3
ENSCCRP00020071017	CID	PF04818	8.9e-08	4

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCCRT00020078015	2853	870aa	ENSCCRP00020071017

Gene Model

Click here to download ENSCCRG00020033220's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCCRG00020033220's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCRG00020033220

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCRG00020033220

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression