RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSCCRG00020030211 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
SMG5 nonsense mediated mRNA decay factor |
Status |
Confidence |
Length |
18899 bases |
Strand |
Plus strand |
Position |
SAUJ01030991.1 : 312718 - 331616 |
RNA binding domain |
EST1 , PIN_4 , EST1_DNA_bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSCCRP00020065244 |
EST1 |
PF10374 |
8.3e-21 |
1 |
ENSCCRP00020065244 |
PIN_4 |
PF13638 |
2.4e-06 |
2 |
ENSCCRP00020065244 |
EST1_DNA_bind |
PF10373 |
4.8e-40 |
3 |
ENSCCRP00020065318 |
EST1 |
PF10374 |
8.4e-21 |
1 |
ENSCCRP00020065318 |
PIN_4 |
PF13638 |
2.4e-06 |
2 |
ENSCCRP00020065318 |
EST1_DNA_bind |
PF10373 |
6.7e-40 |
3 |
ENSCCRP00020065317 |
EST1 |
PF10374 |
8.5e-21 |
1 |
ENSCCRP00020065317 |
PIN_4 |
PF13638 |
3e-06 |
2 |
ENSCCRP00020065317 |
EST1_DNA_bind |
PF10373 |
2.8e-40 |
3 |
ENSCCRP00020065319 |
EST1 |
PF10374 |
8.8e-21 |
1 |
ENSCCRP00020065319 |
PIN_4 |
PF13638 |
3.3e-06 |
2 |
ENSCCRP00020065319 |
EST1_DNA_bind |
PF10373 |
7.6e-41 |
3 |
ENSCCRP00020065146 |
EST1 |
PF10374 |
9.4e-21 |
1 |
ENSCCRP00020065146 |
PIN_4 |
PF13638 |
2.8e-06 |
2 |
ENSCCRP00020065146 |
EST1_DNA_bind |
PF10373 |
3.5e-40 |
3 |
ENSCCRP00020065223 |
EST1 |
PF10374 |
9.4e-21 |
1 |
ENSCCRP00020065223 |
PIN_4 |
PF13638 |
2.8e-06 |
2 |
ENSCCRP00020065223 |
EST1_DNA_bind |
PF10373 |
3.5e-40 |
3 |
ENSCCRP00020065224 |
EST1 |
PF10374 |
9.4e-21 |
1 |
ENSCCRP00020065224 |
PIN_4 |
PF13638 |
2.8e-06 |
2 |
ENSCCRP00020065224 |
EST1_DNA_bind |
PF10373 |
3.5e-40 |
3 |
ENSCCRP00020065233 |
EST1 |
PF10374 |
9.4e-21 |
1 |
ENSCCRP00020065233 |
PIN_4 |
PF13638 |
2.8e-06 |
2 |
ENSCCRP00020065233 |
EST1_DNA_bind |
PF10373 |
3.5e-40 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSCCRT00020071700 |
4738 |
1033aa |
ENSCCRP00020065146 |
- |
ENSCCRT00020071779 |
4738 |
1033aa |
ENSCCRP00020065223 |
- |
ENSCCRT00020071780 |
3985 |
1033aa |
ENSCCRP00020065224 |
- |
ENSCCRT00020071789 |
3985 |
1033aa |
ENSCCRP00020065233 |
- |
ENSCCRT00020071803 |
3360 |
947aa |
ENSCCRP00020065244 |
- |
ENSCCRT00020071876 |
2880 |
959aa |
ENSCCRP00020065317 |
- |
ENSCCRT00020071877 |
2877 |
958aa |
ENSCCRP00020065318 |
- |
ENSCCRT00020071878 |
2961 |
986aa |
ENSCCRP00020065319 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCCRG00020030211 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCCRG00020030211 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |