Description

Ensembl ID ENSCCRG00020029599 Gene ID Accession -
Symbol Alias - Full Name fragile X mental retardation, autosomal homolog 2
Status Confidence Length 18395 bases Strand Plus strand
Position SAUJ01016791.1 : 457453 - 475847 RNA binding domain Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00020065969 Agenet PF05641 1.2e-14 1
ENSCCRP00020065969 KH_1 PF00013 2.3e-18 2
ENSCCRP00020065969 KH_1 PF00013 2.3e-18 3
ENSCCRP00020065969 KH_9 PF17904 5.5e-32 4
ENSCCRP00020065969 FXMRP1_C_core PF12235 1.5e-24 5
ENSCCRP00020065532 Agenet PF05641 5.5e-14 1
ENSCCRP00020065532 FXR_C1 PF16096 2.5e-21 2
ENSCCRP00020065532 KH_1 PF00013 3.1e-15 3
ENSCCRP00020065532 KH_1 PF00013 3.1e-15 4
ENSCCRP00020065532 KH_9 PF17904 6.7e-32 5
ENSCCRP00020065532 FXMRP1_C_core PF12235 3.4e-33 6
ENSCCRP00020065533 Agenet PF05641 1.9e-08 1
ENSCCRP00020065533 FXR_C1 PF16096 2.4e-21 2
ENSCCRP00020065533 KH_1 PF00013 8e-11 3
ENSCCRP00020065533 KH_9 PF17904 6.2e-32 4
ENSCCRP00020065533 FXMRP1_C_core PF12235 3.2e-33 5
ENSCCRP00020066340 Agenet PF05641 3e-08 1
ENSCCRP00020066340 FXR_C1 PF16096 7e-20 2
ENSCCRP00020066340 KH_1 PF00013 3.5e-18 3
ENSCCRP00020066340 KH_1 PF00013 3.5e-18 4
ENSCCRP00020066340 KH_9 PF17904 5.4e-32 5
ENSCCRP00020066340 FXMRP1_C_core PF12235 1.1e-33 6
ENSCCRP00020066205 Agenet PF05641 3.1e-08 1
ENSCCRP00020066205 FXR_C1 PF16096 2.4e-20 2
ENSCCRP00020066205 KH_1 PF00013 3.9e-18 3
ENSCCRP00020066205 KH_1 PF00013 3.9e-18 4
ENSCCRP00020066205 KH_9 PF17904 5.7e-32 5
ENSCCRP00020066205 FXMRP1_C_core PF12235 2.6e-24 6
ENSCCRP00020066603 Agenet PF05641 3.1e-08 1
ENSCCRP00020066603 FXR_C1 PF16096 2.5e-20 2
ENSCCRP00020066603 KH_1 PF00013 4.1e-18 3
ENSCCRP00020066603 KH_1 PF00013 4.1e-18 4
ENSCCRP00020066603 KH_9 PF17904 5.7e-32 5
ENSCCRP00020066603 FXMRP1_C_core PF12235 2.6e-24 6
ENSCCRP00020066829 Agenet PF05641 3.6e-08 1
ENSCCRP00020066829 FXR_C1 PF16096 2.8e-20 2
ENSCCRP00020066829 KH_1 PF00013 5.2e-18 3
ENSCCRP00020066829 KH_1 PF00013 5.2e-18 4
ENSCCRP00020066829 KH_9 PF17904 6.6e-32 5
ENSCCRP00020066829 FXMRP1_C_core PF12235 3e-24 6
ENSCCRP00020066590 Agenet PF05641 3.7e-08 1
ENSCCRP00020066590 FXR_C1 PF16096 2.3e-21 2
ENSCCRP00020066590 KH_1 PF00013 2.6e-15 3
ENSCCRP00020066590 KH_1 PF00013 2.6e-15 4
ENSCCRP00020066590 KH_9 PF17904 6.3e-32 5
ENSCCRP00020066590 FXMRP1_C_core PF12235 3.6e-33 6
ENSCCRP00020066664 Agenet PF05641 3.8e-08 1
ENSCCRP00020066664 FXR_C1 PF16096 1.2e-19 2
ENSCCRP00020066664 KH_1 PF00013 5.5e-18 3
ENSCCRP00020066664 KH_1 PF00013 5.5e-18 4
ENSCCRP00020066664 KH_9 PF17904 7.1e-32 5
ENSCCRP00020066664 FXMRP1_C_core PF12235 1.6e-33 6
ENSCCRP00020066203 Agenet PF05641 1.1e-05 1
ENSCCRP00020066203 FXR_C1 PF16096 2.2e-21 2
ENSCCRP00020066203 KH_1 PF00013 2.4e-15 3
ENSCCRP00020066203 KH_1 PF00013 2.4e-15 4
ENSCCRP00020066203 KH_9 PF17904 5.8e-32 5
ENSCCRP00020066203 FXMRP1_C_core PF12235 2.5e-33 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00020072120 2131 677aa ENSCCRP00020065532
- ENSCCRT00020072121 2080 660aa ENSCCRP00020065533
- ENSCCRT00020072593 1455 484aa ENSCCRP00020065969
- ENSCCRT00020072840 2598 622aa ENSCCRP00020066203
- ENSCCRT00020072842 1704 567aa ENSCCRP00020066205
- ENSCCRT00020072990 1650 549aa ENSCCRP00020066340
- ENSCCRT00020073253 2041 647aa ENSCCRP00020066590
- ENSCCRT00020073266 1728 575aa ENSCCRP00020066603
- ENSCCRT00020073330 1980 659aa ENSCCRP00020066664
- ENSCCRT00020073506 1920 639aa ENSCCRP00020066829

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020029599

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020029599

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression