Description

Ensembl ID ENSCCRG00020020155 Gene ID Accession -
Symbol Alias - Full Name SMG7 nonsense mediated mRNA decay factor
Status Confidence Length 17356 bases Strand Plus strand
Position SAUJ01045287.1 : 1167033 - 1184388 RNA binding domain EST1 , EST1_DNA_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00020049288 EST1 PF10374 7.8e-20 1
ENSCCRP00020049288 EST1_DNA_bind PF10373 6.5e-35 2
ENSCCRP00020049288 EST1_DNA_bind PF10373 6.5e-35 3
ENSCCRP00020049107 EST1 PF10374 7.9e-20 1
ENSCCRP00020049107 EST1_DNA_bind PF10373 6.4e-28 2
ENSCCRP00020049107 EST1_DNA_bind PF10373 6.4e-28 3
ENSCCRP00020049098 EST1 PF10374 7.9e-20 1
ENSCCRP00020049098 EST1_DNA_bind PF10373 6.5e-28 2
ENSCCRP00020049098 EST1_DNA_bind PF10373 6.5e-28 3
ENSCCRP00020049309 EST1 PF10374 7.9e-20 1
ENSCCRP00020049309 EST1_DNA_bind PF10373 1.2e-34 2
ENSCCRP00020049309 EST1_DNA_bind PF10373 1.2e-34 3
ENSCCRP00020049207 EST1 PF10374 7.9e-20 1
ENSCCRP00020049207 EST1_DNA_bind PF10373 1.1e-34 2
ENSCCRP00020049207 EST1_DNA_bind PF10373 1.1e-34 3
ENSCCRP00020049308 EST1 PF10374 8.4e-20 1
ENSCCRP00020049308 EST1_DNA_bind PF10373 1.5e-34 2
ENSCCRP00020049308 EST1_DNA_bind PF10373 1.5e-34 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00020053520 4331 1088aa ENSCCRP00020049098
- ENSCCRT00020053529 4325 1086aa ENSCCRP00020049107
- ENSCCRT00020053639 3912 1095aa ENSCCRP00020049207
- ENSCCRT00020053724 3879 1084aa ENSCCRP00020049288
- ENSCCRT00020053744 4056 1143aa ENSCCRP00020049308
- ENSCCRT00020053745 3906 1093aa ENSCCRP00020049309

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020020155

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020020155

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression