Description

Ensembl ID ENSCCRG00020019272 Gene ID Accession -
Symbol Alias - Full Name RNA binding motif protein 39a
Status Confidence Length 6440 bases Strand Plus strand
Position SAUJ01048551.1 : 119447 - 125886 RNA binding domain RRM_1 , RBM39linker
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00020043892 RRM_1 PF00076 2.7e-39 1
ENSCCRP00020043892 RRM_1 PF00076 2.7e-39 2
ENSCCRP00020043892 RBM39linker PF15519 4.8e-27 3
ENSCCRP00020043820 RRM_1 PF00076 3.3e-39 1
ENSCCRP00020043820 RRM_1 PF00076 3.3e-39 2
ENSCCRP00020043820 RBM39linker PF15519 1.5e-29 3
ENSCCRP00020043822 RRM_1 PF00076 3.7e-39 1
ENSCCRP00020043822 RRM_1 PF00076 3.7e-39 2
ENSCCRP00020043822 RBM39linker PF15519 1.6e-29 3
ENSCCRP00020043870 RRM_1 PF00076 4.5e-39 1
ENSCCRP00020043870 RRM_1 PF00076 4.5e-39 2
ENSCCRP00020043870 RBM39linker PF15519 6.8e-28 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00020047819 2132 510aa ENSCCRP00020043820
- ENSCCRT00020047821 2071 525aa ENSCCRP00020043822
- ENSCCRT00020047872 2144 374aa ENSCCRP00020043870
- ENSCCRT00020047897 1769 472aa ENSCCRP00020043892

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020019272

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020019272

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression