Description

Ensembl ID ENSCCRG00020013639 Gene ID Accession -
Symbol Alias - Full Name U2 snRNP-associated SURP domain containing
Status Confidence Length 10704 bases Strand Plus strand
Position SAUJ01045618.1 : 2176854 - 2187557 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00020034556 RRM_1 PF00076 7e-14 1
ENSCCRP00020034562 RRM_1 PF00076 2e-13 1
ENSCCRP00020034562 Surp PF01805 7.1e-17 2
ENSCCRP00020034562 cwf21 PF08312 1.4e-09 3
ENSCCRP00020034554 RRM_1 PF00076 2e-13 1
ENSCCRP00020034554 Surp PF01805 7.1e-17 2
ENSCCRP00020034554 cwf21 PF08312 1.5e-09 3
ENSCCRP00020034517 RRM_1 PF00076 2.1e-13 1
ENSCCRP00020034517 Surp PF01805 6.8e-17 2
ENSCCRP00020034517 cwf21 PF08312 1.6e-09 3
ENSCCRP00020034517 CID PF04818 4.4e-08 4
ENSCCRP00020034482 RRM_1 PF00076 2.2e-13 1
ENSCCRP00020034482 Surp PF01805 7.8e-17 2
ENSCCRP00020034482 cwf21 PF08312 1.6e-09 3
ENSCCRP00020034423 RRM_1 PF00076 2.4e-13 1
ENSCCRP00020034423 Surp PF01805 8.3e-17 2
ENSCCRP00020034423 cwf21 PF08312 1.7e-09 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00020037608 2799 932aa ENSCCRP00020034423
- ENSCCRT00020037671 2598 865aa ENSCCRP00020034482
- ENSCCRT00020037706 2556 851aa ENSCCRP00020034517
- ENSCCRT00020037753 2415 804aa ENSCCRP00020034554
- ENSCCRT00020037755 1164 387aa ENSCCRP00020034556
- ENSCCRT00020037761 2397 798aa ENSCCRP00020034562

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020013639

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020013639

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression