Description

Ensembl ID ENSCCRG00020010988 Gene ID Accession -
Symbol Alias - Full Name fragile X mental retardation, autosomal homolog 2
Status Confidence Length 18579 bases Strand Minus strand
Position SAUJ01045489.1 : 140305 - 158883 RNA binding domain Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00020036883 Agenet PF05641 9e-14 1
ENSCCRP00020036883 FXR_C1 PF16096 9.8e-21 2
ENSCCRP00020036883 KH_1 PF00013 9.1e-17 3
ENSCCRP00020036883 KH_1 PF00013 9.1e-17 4
ENSCCRP00020036883 KH_9 PF17904 1.9e-31 5
ENSCCRP00020036883 FXMRP1_C_core PF12235 1.9e-34 6
ENSCCRP00020036882 Agenet PF05641 1.1e-13 1
ENSCCRP00020036882 FXR_C1 PF16096 1.1e-20 2
ENSCCRP00020036882 KH_1 PF00013 1.1e-16 3
ENSCCRP00020036882 KH_1 PF00013 1.1e-16 4
ENSCCRP00020036882 KH_9 PF17904 2.1e-31 5
ENSCCRP00020036882 FXMRP1_C_core PF12235 2.1e-34 6
ENSCCRP00020037261 Agenet PF05641 4.3e-08 1
ENSCCRP00020037261 FXR_C1 PF16096 2.7e-19 2
ENSCCRP00020037261 KH_1 PF00013 1.1e-19 3
ENSCCRP00020037261 KH_1 PF00013 1.1e-19 4
ENSCCRP00020037261 KH_9 PF17904 1.5e-31 5
ENSCCRP00020037261 FXMRP1_C_core PF12235 4.4e-25 6
ENSCCRP00020037120 Agenet PF05641 4.6e-08 1
ENSCCRP00020037120 FXR_C1 PF16096 8.5e-21 2
ENSCCRP00020037120 KH_1 PF00013 1.3e-19 3
ENSCCRP00020037120 KH_1 PF00013 1.3e-19 4
ENSCCRP00020037120 KH_9 PF17904 1.6e-31 5
ENSCCRP00020037120 FXMRP1_C_core PF12235 1.5e-34 6
ENSCCRP00020036985 Agenet PF05641 4.8e-08 1
ENSCCRP00020036985 FXR_C1 PF16096 1.2e-20 2
ENSCCRP00020036985 KH_1 PF00013 1.4e-19 3
ENSCCRP00020036985 KH_1 PF00013 1.4e-19 4
ENSCCRP00020036985 KH_9 PF17904 1.7e-31 5
ENSCCRP00020036985 FXMRP1_C_core PF12235 1.5e-34 6
ENSCCRP00020037138 Agenet PF05641 5e-08 1
ENSCCRP00020037138 FXR_C1 PF16096 9.3e-21 2
ENSCCRP00020037138 KH_1 PF00013 1.5e-19 3
ENSCCRP00020037138 KH_1 PF00013 1.5e-19 4
ENSCCRP00020037138 KH_9 PF17904 1.8e-31 5
ENSCCRP00020037138 FXMRP1_C_core PF12235 1.6e-34 6
ENSCCRP00020037121 Agenet PF05641 5e-08 1
ENSCCRP00020037121 FXR_C1 PF16096 8.5e-21 2
ENSCCRP00020037121 KH_1 PF00013 7.7e-17 3
ENSCCRP00020037121 KH_1 PF00013 7.7e-17 4
ENSCCRP00020037121 KH_9 PF17904 1.7e-31 5
ENSCCRP00020037121 FXMRP1_C_core PF12235 1.6e-34 6
ENSCCRP00020036901 Agenet PF05641 5.8e-08 1
ENSCCRP00020036901 FXR_C1 PF16096 1.1e-20 2
ENSCCRP00020036901 KH_1 PF00013 3.1e-07 3
ENSCCRP00020036901 KH_9 PF17904 2.1e-31 4
ENSCCRP00020036901 FXMRP1_C_core PF12235 2e-34 5
ENSCCRP00020036910 Agenet PF05641 6.1e-08 1
ENSCCRP00020036910 FXR_C1 PF16096 1.2e-20 2
ENSCCRP00020036910 KH_1 PF00013 1.2e-16 3
ENSCCRP00020036910 KH_1 PF00013 1.2e-16 4
ENSCCRP00020036910 KH_9 PF17904 2.2e-31 5
ENSCCRP00020036910 FXMRP1_C_core PF12235 2.1e-34 6
ENSCCRP00020037118 FXR_C1 PF16096 9.1e-21 1
ENSCCRP00020037118 KH_1 PF00013 1.5e-19 2
ENSCCRP00020037118 KH_1 PF00013 1.5e-19 3
ENSCCRP00020037118 KH_9 PF17904 1.8e-31 4
ENSCCRP00020037118 FXMRP1_C_core PF12235 1.6e-34 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00020040260 2424 677aa ENSCCRP00020036882
- ENSCCRT00020040261 2325 644aa ENSCCRP00020036883
- ENSCCRT00020040279 2080 660aa ENSCCRP00020036901
- ENSCCRT00020040289 2146 682aa ENSCCRP00020036910
- ENSCCRT00020040370 1707 568aa ENSCCRP00020036985
- ENSCCRT00020040514 1734 577aa ENSCCRP00020037118
- ENSCCRT00020040516 1653 550aa ENSCCRP00020037120
- ENSCCRT00020040517 1755 584aa ENSCCRP00020037121
- ENSCCRT00020040535 1752 583aa ENSCCRP00020037138
- ENSCCRT00020040669 1581 526aa ENSCCRP00020037261

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020010988

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020010988

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression