Description

Ensembl ID ENSCCRG00020008954 Gene ID Accession -
Symbol Alias - Full Name polymerase (RNA) II (DNA directed) polypeptide A
Status Confidence Length 12402 bases Strand Plus strand
Position SAUJ01009061.1 : 393016 - 405417 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 , RNA_pol_Rpb1_R , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00020020600 RNA_pol_Rpb1_4 PF05000 4e-37 1
ENSCCRP00020020600 RNA_pol_Rpb1_1 PF04997 3.4e-108 2
ENSCCRP00020020600 RNA_pol_Rpb1_5 PF04998 8.2e-80 3
ENSCCRP00020020600 RNA_pol_Rpb1_2 PF00623 2.5e-74 4
ENSCCRP00020020600 RNA_pol_Rpb1_3 PF04983 2e-49 5
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 6
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 7
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 8
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 9
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 10
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 11
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 12
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 13
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 14
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 15
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 16
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 17
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 18
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 19
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 20
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 21
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 22
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 23
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 24
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 25
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 26
ENSCCRP00020020600 RNA_pol_Rpb1_R PF05001 7.7e-23 27
ENSCCRP00020020600 RNA_pol_Rpb1_6 PF04992 1.1e-67 28
ENSCCRP00020020600 RNA_pol_Rpb1_7 PF04990 2.5e-54 29
ENSCCRP00020020551 RNA_pol_Rpb1_4 PF05000 4.1e-37 1
ENSCCRP00020020551 RNA_pol_Rpb1_1 PF04997 3.6e-108 2
ENSCCRP00020020551 RNA_pol_Rpb1_5 PF04998 8.7e-80 3
ENSCCRP00020020551 RNA_pol_Rpb1_2 PF00623 2.7e-74 4
ENSCCRP00020020551 RNA_pol_Rpb1_3 PF04983 2.1e-49 5
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 6
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 7
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 8
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 9
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 10
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 11
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 12
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 13
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 14
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 15
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 16
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 17
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 18
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 19
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 20
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 21
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 22
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 23
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 24
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 25
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 26
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 27
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 28
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 29
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 30
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 31
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 32
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 33
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 34
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 35
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 36
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 37
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 38
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 39
ENSCCRP00020020551 RNA_pol_Rpb1_R PF05001 3.9e-34 40
ENSCCRP00020020551 RNA_pol_Rpb1_6 PF04992 1.1e-67 41
ENSCCRP00020020551 RNA_pol_Rpb1_7 PF04990 2.6e-54 42
ENSCCRP00020020540 RNA_pol_Rpb1_4 PF05000 4.2e-37 1
ENSCCRP00020020540 RNA_pol_Rpb1_1 PF04997 3.7e-108 2
ENSCCRP00020020540 RNA_pol_Rpb1_5 PF04998 9.3e-80 3
ENSCCRP00020020540 RNA_pol_Rpb1_2 PF00623 2.8e-74 4
ENSCCRP00020020540 RNA_pol_Rpb1_3 PF04983 2.2e-49 5
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 6
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 7
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 8
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 9
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 10
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 11
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 12
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 13
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 14
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 15
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 16
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 17
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 18
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 19
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 20
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 21
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 22
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 23
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 24
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 25
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 26
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 27
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 28
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 29
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 30
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 31
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 32
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 33
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 34
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 35
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 36
ENSCCRP00020020540 RNA_pol_Rpb1_R PF05001 5e-29 37
ENSCCRP00020020540 RNA_pol_Rpb1_6 PF04992 1.1e-67 38
ENSCCRP00020020540 RNA_pol_Rpb1_7 PF04990 2.7e-54 39

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00020022561 5935 1920aa ENSCCRP00020020540
- ENSCCRT00020022572 5818 1881aa ENSCCRP00020020551
- ENSCCRT00020022626 5526 1841aa ENSCCRP00020020600

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020008954

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020008954

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression